XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
ACATCTTCATCTGCAGGCCTCTAGGAGAAGACTGGCTTCCAGGCAGCTAG
GATGAGTGTATTAAAACCCATGCCCATCTTGGTACCGGGACTCAGCAGAA
CTTAGGAAATTAATCTGAACAGGTTAGAGGGTGCGCCAGAGAACCGGACA
GCTTCTGGGACGGGCAGAAGCACAGAGCCGCTGAGGCAGCAGCCTGGGCG
GGCCGCAGACAACCGGCCACCATCCGGACCAGAGGACAGGTGTCCGCCTG
GCTTGGGAGGCGACCTCAGCCTCGGCAGCAGCGGTCGCCATCGTGGTTCC
GGGACTCAGCAGAACTTATGAAATTAGTCTGAGCAGGGTAGAGGGTGCCG
CAGAGAACCGGACAGCTTGTGGGACGTTCAGATACACTGAGCCGCTGAGG
GAGCGGTCTTGCTCGGTCTGCCGATAACCGGTCTCCATGTCAGTATTTAT
TGACTGGTGCGTCGCTTGGTTTCGTAACGATGGCTTCTTCGTTAATTGAG
TATTCGTTTGTTATTCTTTGTTTTTTCGTTATCTCCTTGGTACTCTTATA
TCGCTCGTTCGTTTTTTGTCTATTTTCGTTTCCTTTTTTTTATCGTTTTC
TCGGTTTCCTTTTTCCCCTTCCTTCCCGTTTTTTCTTTCTCATTTCTTTT
TTTTACGCTTTTTCCTTTTCGAATACTTGTTTGGCGCCTATTCTTTTTTT
TTTCCGCGCTTTTCCCTCTCTTTACTCCCCTTATTTCCCCTCCTTCTTCT
CGCTTCTTCCCTCTTCT

AGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTGAAACAAAGGAGCTTAAGAAAACTCTGCTC
CATTTCCTGAGAGGCAAGTGGCTGTTTCTATCTTTTTCATTTGTACTTTC
TCTAGAAACATGCATACAAGAACTGTGTAGCAAGAAAGAGACCAGAACAA
ATATGAAGCAGTAAAAATAAACATAATTAATTAATTAATACTGAATTAAT
TACAGGCTTTGTGAGACTGGGGAAAACTACAGACTAGACACTTGATAAAA
AATGGTGTGGTTGTTGCTCAGCCTTAGCTGGATGGCAGAGGTGGAAAAGC
AATAGTGAGACCTCTCTCTTTCTCTTTCTTTCTTCTTTTTTCTTTCCTTT
CTTCTTTCCTTTCTCATGAGTCTGTATGTGCAATTGCACATGTAAATGTT
TATATTTATGTATGCATGCATGCATGCACCATCCCCATGGTGTTTGTGTA
TGTGTGTGCGCATGTACTCCCTACCTATTTCTACTATCACACACTTTATT
CTGCTTTTTTTCTTCGACTTTCCCTATTATTTCCCTTTTCTTCATGTGAT
CTACTTCTTCCTTCTTTCCTTTATTCAATCTTTTGTTTCCCTCTTTTACT
TACTCTATCATTTCCACCTCGCTCTTTTCATTTCCATTAATCGTCCTTTT
CTCTATTATTTTCCCCCTTCCTACCTTTTTGACCTTGAGATATGTTTTCT
CATTGCTTTTTTATGTTGGCAATGCCTCGCCTTTCTATCCTTGTATCCCT

Query= MSMg01no426_l03.g1 MSMg01no426_l03.g1 CHROMAT_FILE:
MSMg01no426_l03.g1 PHD_FILE: MSMg01no426_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:20 2005
         (441 letters)



>mm_chr6_106799059_106799899
          Length = 841

 Score =  816 bits (422), Expect = 0.0
 Identities = 434/440 (98%), Gaps = 4/440 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttgaaacaaaggagcttaagaaaactctgctccatttcctgagaggcaagtggctgtttc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgaaacaaaggagcttaagaaaactctgctccatttcctgagaggcaagtggctgtttc 260

                                                                       
Query: 61  tatctttttcatttgtactttctctagaaacatgcatacaagaactgtgtagcaagaaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 tatctttttcatttgtactttctctagaaacatgcatacaagaactgcgtagcaagaaag 320

                                                                       
Query: 121 agaccagaacaaatatgaagcagtaaaaataaacataattaattaattaatactgaatta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaccagaacaaatatgaagcagtaaaaataaacataattaattaattaatactgaatta 380

                                                                       
Query: 181 attacaggctttgtgagactggggaaaactacagactagacacttgataaaaaatggtgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attacaggctttgtgagactggggaaaactacagactagacacttgataaaaaatggtgt 440

                                                                       
Query: 241 ggttgttgctcagccttagctggatggcagaggtggaaaagcaatagtgagacctctctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttgttgctcagccttagctggatggcagaggtggaaaagcaatagtgagacctctctc 500

                                                                       
Query: 301 tttctctttctttcttcttttttctttcctttcttctttcctttctcatgagtctgtatg 360
           |    |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 t----ctttctttcttcttttttctttcctttcttctttcctttctcatgagtctgtatg 556

                                                                       
Query: 361 tgcaattgcacatgtaaatgtttatatttatgtatgcatgcatgcatgcaccatccccat 420
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgcaattgcacgtgtaaatgtttatatttatgtatgcatgcatgcatgcaccatccccat 616

                               
Query: 421 ggtgtttgtgtatgtgtgtg 440
           ||||||||||||||||||||
Sbjct: 617 ggtgtttgtgtatgtgtgtg 636


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space:   359424
Effective search space used:   359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)