NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTCTCTTACCTGCGTACAAGGCTTGTTTACTAGTTAGGC
ACAGCGGAGGCCCGCGCCATCTTATAATGGTGATTGCTCGCTGCACACAC
GGCTCTCCTCAGAGATTACTGGCGGCACACATGCGATTGCTCGCAGCACG
TACCGGCTTTCCACATCTCCCCCTTTTTATTTTATTAAAATTTAAGGCTG
GTCTAGGCCTGTGTAATTATGCCCATCCGCTGTGGCTCCTGTCTTAGGTC
GTTCCTCCAATGTCACAGCCTTTCCTGTTATAGGGTAACCCTATCGCCAC
CGGGCCCCGTGTCTTAGGTTGATCTGTGCATGAGGAAAGTTGCCCGTCCC
TGGATACCGCAGTGCTATATGACATTAACTACTAAATGACCTAGGGCGAA
CTCTATAAAAGAGGCCAGCCACCAATGTCAATTAATTTTTTAGCATAGAT
AGCCAGATTTCAGGGGAGGCCCCTTGCTCGATGGCAGCAAGTGCTTGAGT
TATCACAACCTTGTCACGTGTTTGTTGGGTTCTGAGCTTGCAAACCAACC
AGAGCATGACCACAAGTCCACAGCAGGTGGCAACGCCAAATAAACCTACC
CCCACCCATTCCTTAAAATAAGAAAAGGCAGATGAAATCCAGGAAGAGAG
GGCCTCTGTCAATGACAGTTCCACTCCTGTCCAAGTG

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAGAGAATTGAGTCTTTGTG
TGAGAACTCTGCTTTTTCGAATTGTGATGAGTCAGCTGCCTCGCCATTAC
CAGCTTTAAAAGTGTTCCACGTTTAGAAAGATCAATGCAATCAAAACTCC
AGACTCCACCATTTCAAAGCAAATGCTTATGTTGAACCTTATGCGAGAGG
CTGTCAGGATGGAGCTTGCATTATTCAAACATGTGTATCAGCAACCTACT
GGTTCCAGCTCCTCAGTTAGGAAAACAGTGTATAATAGATGATATAAATA
CAGTGTAAGCCATACTTCACCTGAAGTTCAAAAATAGACGTTCTGAAATC
ATGACTCTTGAGGTGAGAAACTGATAGACATTTGGAATGAGGAGATTTCA
AATGACAAATTAATATTTAGCTCAAATAAGAAGAACATCTGTTCAAATAA
GAAATTGAAGAGGGTATAATTTTCTTACGTTGGTAACACTTCTATTTGAC
CCAAGTATGATTTTTGTCTCATAATATATTTCATCTTCATCTATGTCTCT
GCTGAAACATTGCATTTTATTTATTTTTTTCTTATTGGCTTACAGAGTAT
GTGCCATAGTCTGGGTGATTATCCAATCAAATTTCTCTTCCCTATTTTCA
TTCACCCCTTCCCCCTTTTCTGCTTCAGCTGTCCCATTTN

Query= MSMg01no427_o08.g1 MSMg01no427_o08.g1 CHROMAT_FILE:
MSMg01no427_o08.g1 PHD_FILE: MSMg01no427_o08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:54 2005
         (583 letters)



>mm_chr6_26648485_26649460
          Length = 976

 Score = 1004 bits (519), Expect = 0.0
 Identities = 564/583 (96%), Gaps = 7/583 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagagaattgagtctttgtgtgagaactctgctttttcgaattgtgatgagtcagctgcc 60
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tagagaattgagtctttgtgtgagaactctggtttttcgaattgtgatgagtcagctgcc 260

                                                                       
Query: 61  tcgccattaccagctttaaaagtgttccacgtttagaaagatcaatgcaatcaaaactcc 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 tcgccattaccagctttaaaagtgttccacatttagaaagatcaatgcaatcaaaactcc 320

                                                                       
Query: 121 agactccaccatttcaaagcaaatgcttatgttgaaccttatgcgagaggctgtcaggat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactccaccatttcaaagcaaatgcttatgttgaaccttatgcgagaggctgtcaggat 380

                                                                       
Query: 181 ggagcttgcattattcaaacatgtgtatcagcaacctactggttccagctcctcagttag 240
           | ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 gcagcttacattattcaaacatgtgtatcagcaacctactgggtccagctcctcagttag 440

                                                                       
Query: 241 gaaaacagtgtataatagatgatataaatacagtgtaagccatacttcacctgaagttca 300
           |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaaacagtgaagaatagatgatataaatacagtgtaagccatacttcacctgaagttca 500

                                                                       
Query: 301 aaaatagacgttctgaaatcatgactcttgaggtgagaaactgatagacatttggaatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatagacgttctgaaatcatgactcttgaggtgagaaactgatagacatttggaatga 560

                                                                       
Query: 361 ggagatttcaaatgacaaattaatatttagctcaaataagaagaacatctgttcaaataa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 561 ggagatttcaaatgacaaattaatatttagctcaaataagaagaacatctgttaaaataa 620

                                                                       
Query: 421 gaaattgaagagggtataattttcttacgttggtaacacttctatttgacccaagtatga 480
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaattgaagagagtataattttcttacgttggtaacacttctatttgacccaagtatga 680

                                                                       
Query: 481 tttttgtctcataatatatttcatcttcatctatgtctctgctgaaacattgcattttat 540
           ||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||  
Sbjct: 681 tttttgtctcataatatatttcatctttatatatgtctctgctgatacattgcatttt-- 738

                                                      
Query: 541 ttatttttttcttattggcttacagagtatgtgccatagtctg 583
                ||||||||||||||||||||||||||||||||||||||
Sbjct: 739 -----tttttcttattggcttacagagtatgtgccatagtctg 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 976
Length adjustment: 10
Effective length of query: 573
Effective length of database: 966
Effective search space:   553518
Effective search space used:   553518
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)