Query= MSMg01no427_p17.b1 MSMg01no427_p17.b1 CHROMAT_FILE:
MSMg01no427_p17.b1 PHD_FILE: MSMg01no427_p17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:01 2005
(524 letters)
>mm_chr6_135835934_135836858
Length = 925
Score = 1002 bits (518), Expect = 0.0
Identities = 521/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacaacatttctttac-aagcatgctgtttggtacttaccagaggtccttgt 62
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 725 ggaattctcacaacatttctttacaaagcatgctgtttggtacttaccagaggtccttgt 666
Query: 63 gaccatgcaatgagagtcttgctcaaggactaagatgctaaaggacagacaacctcatat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaccatgcaatgagagtcttgctcaaggactaagatgctaaaggacagacaacctcatat 606
Query: 123 aagtttcacatgtggatgctgaggtccctaagtgcttagtgcttttccaaatgagaagct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aagtttcacatgtggatgctgaggtccctaagtgcttagtgcttttccaaatgagaagct 546
Query: 183 tagttttgtactgatccctagcatagctactattccagcagaatactattcttattcgaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tagttttgtactgatccctagcatagctactattccagcagaatactattcttattcgaa 486
Query: 243 tcctccatggaacctctctgattcacctcctcacacaatgctggtctgtctctaaccttg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tcctccatggaacctctctgattcacctcctcacacaatgctggtctgtctctaaccttg 426
Query: 303 cacactcttaagtttccacgtttgcattccagttccacccctctatttaacaactagcat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cacactcttaagtttccacgtttgcattccagttccacccctctatttaacaactagcat 366
Query: 363 accttcgttaagaatgtattttttgtttttttttgtcaaagttaacacagtaaccacagt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 accttcgttaagaatgtattttttgtttttttttgtcaaagttaacacagtaaccacagt 306
Query: 423 gttagcaggtgagggttgattttggcatcagcaatagtgtcacggctaatagtaaccagt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gttagcaggtgagggttgattttggcatcagcaatagtgtcacggctaatagtaaccagt 246
Query: 483 gcaggtgtcaggtattagtagagctaacagaggtcagttcag 524
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcaggtgtcaggtattagtagagctaacagaggtcagttcag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_p17.g1 MSMg01no427_p17.g1 CHROMAT_FILE:
MSMg01no427_p17.g1 PHD_FILE: MSMg01no427_p17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:01 2005
(494 letters)
>mm_chr6_135823429_135824322
Length = 894
Score = 955 bits (494), Expect = 0.0
Identities = 494/494 (100%)
Strand = Plus / Plus
Query: 1 agaggactttccagaagatggctaaagacaaaaaaaaaagaacactttgaggcaaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggactttccagaagatggctaaagacaaaaaaaaaagaacactttgaggcaaatctg 260
Query: 61 gggttgtttttcatgacacagaagaagctgaaaggctacaatggattgtttgtttgtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggttgtttttcatgacacagaagaagctgaaaggctacaatggattgtttgtttgtttg 320
Query: 121 cttgtttgtttgtttccaagttcatgagagattgttattgatgacctcatcagcagccgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgtttgtttgtttccaagttcatgagagattgttattgatgacctcatcagcagccgc 380
Query: 181 tccccatgacctcagtggacaacacaagaaaatgaattccaagcaacaacatttcaacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccccatgacctcagtggacaacacaagaaaatgaattccaagcaacaacatttcaacta 440
Query: 241 gacaaggagacgcctgctcagctgcttaaatactgggataaaggtcgcaagaaacgttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacaaggagacgcctgctcagctgcttaaatactgggataaaggtcgcaagaaacgttgc 500
Query: 301 catgctcttcttgcgaagtgtttccagggacaatgagcttagcagaggacacatctgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgctcttcttgcgaagtgtttccagggacaatgagcttagcagaggacacatctgaat 560
Query: 361 acaggggagatgacttccagtgttacctcaagtgtttgaattgatacggtcttacagggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggggagatgacttccagtgttacctcaagtgtttgaattgatacggtcttacagggt 620
Query: 421 ttaccggtgtgtctcattggttacagaaataaattggaactggaaagaggccgaggctca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaccggtgtgtctcattggttacagaaataaattggaactggaaagaggccgaggctca 680
Query: 481 ataatcctgagaac 494
||||||||||||||
Sbjct: 681 ataatcctgagaac 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
