Query= MSMg01no429_l13.b1 MSMg01no429_l13.b1 CHROMAT_FILE:
MSMg01no429_l13.b1 PHD_FILE: MSMg01no429_l13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:17 2005
(534 letters)
>mm_chr6_86850669_86851601
Length = 933
Score = 1009 bits (522), Expect = 0.0
Identities = 531/534 (99%), Gaps = 1/534 (0%)
Strand = Plus / Minus
Query: 1 ataaaaggcaagctagccctgggcacgtcaccaagcttttccagaaacctagttttttat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ataaaaggcaagttagccctgggcacgtcaccaagcttttccagaaacctagttttttat 518
Query: 61 cagtataataataatgtggagctggcagagggggggggggagaccctgacttttggagca 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 517 cagtataataataatgtggagctggcagaggggggggggg-gaccctgacttttggagca 459
Query: 121 tctgccataatttgatgagttttctggaatgtgaaatatatagccctacctcctgaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 tctgccataatttgatgagttttctggaatgtgaaatatatagccctacctcctgaactc 399
Query: 181 tgcacaggggcactaaccagaggccctgagctacgggaagaaactaagagcatcccttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tgcacaggggcactaaccagaggccctgagctacgggaagaaactaagagcatcccttcc 339
Query: 241 tgtaggtgttccccttcactccaatcactgattttctcaacatcagccattttcaaaacc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcaggtgttccccttcactccaatcactgattttctcaacatcagccattttcaaaacc 279
Query: 301 taaaagtaaagtcaatttgtagtagaaggcttcctggggtgctcaggaaactggagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 taaaagtaaagtcaatttgtagtagaaggcttcctggggtgctcaggaaactggagggct 219
Query: 361 ccctcttaagccactccctgtggtggtttgaagaagtatggctcccaaagattcatgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ccctcttaagccactccctgtggtggtttgaagaagtatggctcccaaagattcatgtgt 159
Query: 421 ttaaatgcttggctcataagcagtggcattaggaggtgtggtcttattggagttggtgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ttaaatgcttggctcataagcagtggcattaggaggtgtggtcttattggagttggtgtg 99
Query: 481 gccttgtggaggaagtgtgtcaccgtgggggcaggctttgaggtatcctgtgtt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 gccttgtggaggaagtgtgtcaccgtgggggcaggctttgaggtatcctgtgtt 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 933
Length adjustment: 10
Effective length of query: 524
Effective length of database: 923
Effective search space: 483652
Effective search space used: 483652
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_l13.g1 MSMg01no429_l13.g1 CHROMAT_FILE:
MSMg01no429_l13.g1 PHD_FILE: MSMg01no429_l13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:18 2005
(337 letters)
>mm_chr6_86713572_86714309
Length = 738
Score = 571 bits (295), Expect = e-167
Identities = 329/349 (94%), Gaps = 18/349 (5%)
Strand = Plus / Plus
Query: 1 attgaaagtttctggatggttctcagacaccgagttcaagtttaaagtgcattgctgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgaaagtttctggatggttctcagacaccgagttcaagtttaaagtgcattgctgatg 260
Query: 61 ccactgttgtaagatgaagattaatgtctgacgaagaatcgatagaggtgtttgcaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccactgttgtaagatgaagattaatgtctgacgaagaatcgatagaggtgtttgcaaggg 320
Query: 121 tgggtccatttacctagcaacatcctacacaactctttcttgttctgggggaaaagttgg 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tgggtccatttacctagcaacatcctacacaactttttcttgttctgggggaaaagttgg 380
Query: 181 ggtttcttttccccttgtgagtctttttttttt---cttttttttttt---agatgaagt 234
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 381 agtttcttttccccttgtgagtctttttttttttttcttttttttttttttagatgaagt 440
Query: 235 acttttttttttatttaaa------gatttatttattattatatctaagtacactgtagc 288
||||||||| | ||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 acttttttt---a---aaaaaaaaagatttatttattattatatctaagtacactgtagc 494
Query: 289 tgtcttcagatgtaccagaagagagtgtcagatctcattatggatggtt 337
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgtcttcagatgtaccagaagagagtgtcagatctcattatggatggtt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 738
Length adjustment: 9
Effective length of query: 328
Effective length of database: 729
Effective search space: 239112
Effective search space used: 239112
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
