Query= MSMg01no429_p13.b1 MSMg01no429_p13.b1 CHROMAT_FILE:
MSMg01no429_p13.b1 PHD_FILE: MSMg01no429_p13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:36 2005
(482 letters)
>mm_chr6_114407316_114408197
Length = 882
Score = 909 bits (470), Expect = 0.0
Identities = 479/482 (99%)
Strand = Plus / Minus
Query: 1 gtgaactccagggtcccggacttgggacagccctcaaaggccttggaggcacagatctga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 682 gtgaactccagggtcccggacttgggacagcccccaaaggccttggaggcacagatctga 623
Query: 61 ttctggcagtttgatgacatttttaagtgctgcatctcttatgtagctctgaacaccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttctggcagtttgatgacatttttaagtgctgcatctcttatgtagctctgaacaccagc 563
Query: 121 agccactgggcccttccacgccatccccaccttatcccagtgtctagagtgaacagtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agccactgggcccttccacgccatccccaccttatcccagtgtctagagtgaacagtcac 503
Query: 181 cctaggaaggcagattctgccccgagcctcactcccagctcagccttatccttggccctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cctaggaaggcagattctgccccgagcctcactcccagctcagccttatccttggccctg 443
Query: 241 taccatctctgacttagctaaccctcagccacattttcagaggaggtgccaccccttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 taccatctctgacttagctaaccctcagccacattttcagaggaggtgccaccccttgtc 383
Query: 301 tcagctcagttacaatgtggagactctgaaggatctgaagacacctctataccattgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcagctcagttacaatgtggagactctgaaggatctgaagacacctctataccattgcct 323
Query: 361 ctgacagacacatccttaacctaaaatagaccagagaggcgccgagcctgttcttctgcc 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 ctgacagacacatccttaacctaaaatagaccagagaggcgctgagcctgttcttctgcc 263
Query: 421 tgggtgagatgcctcctttccccctgacctaaaccacaggatgggaagtgatcaggtccc 480
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgggtgagatgcctcctttccccgtgacctaaaccacaggatgggaagtgatcaggtccc 203
Query: 481 tg 482
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_p13.g1 MSMg01no429_p13.g1 CHROMAT_FILE:
MSMg01no429_p13.g1 PHD_FILE: MSMg01no429_p13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:36 2005
(296 letters)
>mm_chr6_114209756_114210450
Length = 695
Score = 534 bits (276), Expect = e-156
Identities = 291/298 (97%), Gaps = 5/298 (1%)
Strand = Plus / Plus
Query: 1 aagtgttttgtcgtgaacctgagagccaggcttctgagggggcctagggacagtgcaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtgttttgtcgtgaacctgagagccaggcttctgagggggcctagggacagtgcaagt 260
Query: 61 acctcaggggtggcagcagctggaagctcaggagcagatgccaggtgacagtcatcgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acctcaggggtggcagcagctggaagctcaggagcagatgccaggtgacagtcatcgctg 320
Query: 121 atttcctaggtcagggcttcagtaagcttgtccagcctgcaaagggggtctgcagctttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttcctaggtcagggcttcagtaagcttgtccagcctgcaaagggggtctgcagctttg 380
Query: 181 cgagtgcactaggagcctcatggcttcttcatcttgggcagctttttccctactctttcc 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagtgcactaggagcctcatggcttcttcatcttgggcagctttttccctactctttcc 440
Query: 241 ctctg--ttttttctttccagcctcccccaccgtgtgtgtgtgtgtgtgtgtgtgtgt 296
||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 ctctggcttt---ctttccagcctcccccaccctgtgtgtgtgtgtgtgtgtgtgtgt 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 296
Length of database: 695
Length adjustment: 9
Effective length of query: 287
Effective length of database: 686
Effective search space: 196882
Effective search space used: 196882
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
