Query= MSMg01no433_f10.b1 MSMg01no433_f10.b1 CHROMAT_FILE:
MSMg01no433_f10.b1 PHD_FILE: MSMg01no433_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:24 2005
(343 letters)
>mm_chr6_89759942_89760685
Length = 744
Score = 596 bits (308), Expect = e-175
Identities = 335/344 (97%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 agaaaacttacagtgatatgattgtttgccatcaggaatacctgttcaccaggaacaata 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 201 agaaaacttacagtgatatgattgtttgccatcaggaatacatgttcaccaggaacaata 260
Query: 61 cagataacatttctctagtcatcctgata-cctccaagtttcactgaccatacaattctt 119
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 cagataacatttctctagtcatcctgataacctccaagtttcactgaccatacaattctt 320
Query: 120 tataattttatatcataaaaatcaatgccatgcagtggtggcagatacctgaattctagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataattttatatcataaaaatcaatgccatgcagtggtggcagatacctgaattctagc 380
Query: 180 acttcaaaggcagaggtttgtggatgttcaagttcaaggcctaactggtttacagagtga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttcaaaggcagaggtttgtggatgttcaagttcaaggcctaactggtttacagagtga 440
Query: 240 gttctatttctcccatggctacacagagaaaccatgatttgaaaaagcaaacaacaaaaa 299
|||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 gttctaagacacccatggctacacagagaaaccgtgatttgaaaaagcaaacaacaaaaa 500
Query: 300 gcatcagtgaggcttcaaattctagacaggggtataatttctac 343
|||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 501 gcatcagtgaggctgcaaattctagacaggtgtataatttctac 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_f10.g1 MSMg01no433_f10.g1 CHROMAT_FILE:
MSMg01no433_f10.g1 PHD_FILE: MSMg01no433_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:24 2005
(134 letters)
>mm_chr6_90098103_90098636
Length = 534
Score = 228 bits (118), Expect = 8e-65
Identities = 130/134 (97%)
Strand = Plus / Plus
Query: 1 cttgtggcttttatctgaggagggtccatactcaccagaggtttttctctagaaattatg 60
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 cttgtggcttgtatctgaggagggtgcatactcaccagaggtttttctctagaaattata 260
Query: 61 catctgtctagaatctgcatgccttactgattgtttttgttgtttggattttcaacatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 catctgtctagaatctgcatgccttactgattgtttttgttgtttggatattcaacatgg 320
Query: 121 ggtttctctgtgta 134
||||||||||||||
Sbjct: 321 ggtttctctgtgta 334
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 134
Length of database: 534
Length adjustment: 8
Effective length of query: 126
Effective length of database: 526
Effective search space: 66276
Effective search space used: 66276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
