Query= MSMg01no433_l19.b1 MSMg01no433_l19.b1 CHROMAT_FILE:
MSMg01no433_l19.b1 PHD_FILE: MSMg01no433_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:55 2005
(376 letters)
>mm_chr6_77441256_77442032
Length = 777
Score = 677 bits (350), Expect = 0.0
Identities = 368/374 (98%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgccctgtacaactgttaacat-aaaaaaaaaagtgtgtttcaaaccactaaa 62
|||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 577 ggaattctgccctgaagaactgttaacataaaaaaaaaaagtgtgtttcaaaccactaaa 518
Query: 63 attttagcagtctgtggtggcagcgatagagtttcttggattctgttgttctctgaaaaa 122
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 attttagcagtctgtggcggcagcgatagagtttcttggattctgttgttctctgaaaaa 458
Query: 123 gtgacctatgggctaactccagatggtaatggttgtggaaagagcttagctggtttccca 182
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gtgacctatgggctgactccagatggtaatggttgtggaaagagcttagctggtttccca 398
Query: 183 cacttgtcttgctgaggtcttttagggtgtatcttgtgacttttagctgctcagcgtccc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cacttgtcttgctgaggtcttttagggtgtatcttgtgacttttagctgctcagcgtccc 338
Query: 243 actgggcatttgagaacttcctaagtgctctgtactgtttcaaactccaaacatccctca 302
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 337 actgggcatttgagaacttcctaagtgctctgtactttttcaaactccaaacatccctca 278
Query: 303 cagtcattatttggcaaatgaaggactgagtcttaatatgcatttaggctctgatagtgc 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cagtcattatttggcaaatgaaggactgagtcttaatatgcatttaggctctgatagtgc 218
Query: 363 cagttttcaaatgt 376
||||||||||||||
Sbjct: 217 cagttttcaaatgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 777
Length adjustment: 9
Effective length of query: 367
Effective length of database: 768
Effective search space: 281856
Effective search space used: 281856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_l19.g1 MSMg01no433_l19.g1 CHROMAT_FILE:
MSMg01no433_l19.g1 PHD_FILE: MSMg01no433_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:55 2005
(396 letters)
>mm_chr6_77251946_77252741
Length = 796
Score = 743 bits (384), Expect = 0.0
Identities = 393/396 (99%)
Strand = Plus / Plus
Query: 1 atttagagagggataagaaacctggatgtgagcaactcaggaaagatggcacagtggaat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 atttagagagggataagaaacctggatgtgagcaactcaggaaagatggcacagtggact 260
Query: 61 ctaaaatgaatgctggttgggtaaagctccgcaacacagaggagtccgatgaggtgtgca 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 ctaaaatgaatgctggttgggtaaagctccgaaacacagaggagtccgatgaggtgtgca 320
Query: 121 agtgtgaaagcctaaagacagtttatgctttctctccagtcacagcagggagactattca 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 agtgtgaaagcctaaagacagtttacgctttctctccagtcacagcagggagactattca 380
Query: 181 actattggagagtctctgcatcagctaacatccacagagctctggaagcaaaactgactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actattggagagtctctgcatcagctaacatccacagagctctggaagcaaaactgactt 440
Query: 241 tattccagacagaggaggaaggttctcacaagggctcagataactgacaccggagaatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattccagacagaggaggaaggttctcacaagggctcagataactgacaccggagaatca 500
Query: 301 taaaaagctgactgttgtctgagagttcaagccgtccagcctctacagttaatggatgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taaaaagctgactgttgtctgagagttcaagccgtccagcctctacagttaatggatgag 560
Query: 361 gaaggtgaaatccaaagagattggtcaaatactaat 396
||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaggtgaaatccaaagagattggtcaaatactaat 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
