Query= MSMg01no434_j23.b1 MSMg01no434_j23.b1 CHROMAT_FILE:
MSMg01no434_j23.b1 PHD_FILE: MSMg01no434_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:05 2005
(550 letters)
>mm_chr6_118206787_118207736
Length = 950
Score = 957 bits (495), Expect = 0.0
Identities = 534/547 (97%), Gaps = 2/547 (0%)
Strand = Plus / Minus
Query: 5 gaattccttctgggttccgcatagattccctagactctcagatctcggcctgaggctgga 64
||||||||||||||| | |||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 750 gaattccttctgggtacagcatagattccctagactctcagatctcagcccgaggctgga 691
Query: 65 gtgccctaggatggctctctagagacacaatagctgcagtgaatctctcagcagaaatgc 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 gtgccctaggatggctctctagagacacaatagctgcagtgaatctctcagcagaaatgt 631
Query: 125 tcacggtccccaggtacatgagaagcaccaggcttgcaaagcttcacattttatgtccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 tcacggtccccaggtacatgagaagcaccaggcttgcaaagcttcacattttatgtccat 571
Query: 185 aagtgattttcatcacaggagttctctgaacttttttgtatgaatctccaaagagtggga 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 570 aagtgattttcatcacaggagttctcggaacttttttgtatgaatctccaaagagtggga 511
Query: 245 caagcaataatgctgcaaactccatgtgacttaggcctctatctcccaccgagcatgctg 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 510 caagcaataatgctgcaaactccatgtgacttaggcctctatctcccactgagcatgctg 451
Query: 305 gaaagtagcccatcatcagtgggttatctaccatgcatccgtattactcctttctccaag 364
||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct: 450 gaaagtagcccatcatcagtggggtatctaccatgcatccatattactcctttctccaag 391
Query: 365 accatgacttccatagaggttcctggctgcctgcccttcctgaagtcgtttataggtgat 424
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 390 accatgacttccatagaggttcctggctgcctgcccttcctgaagtcatttataggtgat 331
Query: 425 gagctggcttcccagccccaggacacagaataatggatttgaaccccctaccaaagccca 484
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 gagctggctgcccagccccaggacacagaataatggatttgaaccccctaccaaagccca 271
Query: 485 cagaaggaga-agctccagaacaggagaaaggatctgagtagaaagtgagggccctaagc 543
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 cagaaggagaca-ctccagaacaggagaaaggatctgagtagaaagtgagggccctaagc 212
Query: 544 ctccaca 550
|||||||
Sbjct: 211 ctccaca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 950
Length adjustment: 10
Effective length of query: 540
Effective length of database: 940
Effective search space: 507600
Effective search space used: 507600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_j23.g1 MSMg01no434_j23.g1 CHROMAT_FILE:
MSMg01no434_j23.g1 PHD_FILE: MSMg01no434_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:05 2005
(435 letters)
>mm_chr6_118024852_118025688
Length = 837
Score = 777 bits (402), Expect = 0.0
Identities = 428/440 (97%), Gaps = 8/440 (1%)
Strand = Plus / Plus
Query: 1 tgaatgttcttggcaatcctacc----cacaacagaggatgcccaactcctgcttcccag 56
||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 201 tgaatgttcttggcaatcc---caagacacaacagaggatgcccaactcctgcttcccag 257
Query: 57 atgtgcgtgaaactggccccttcttaggccgttcattgctctactctctgctggaatggg 116
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 258 atgtgcgtgaaactggccccttcttaggccgttcattgccctactctctgctggaatggg 317
Query: 117 gttggctgggttgaagggcagcctgctagctggctgtccctctgggacatccaaagtcct 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gttggctgggttgaagggcagcctgctagctggctgtccctctgggacatccaaagtcct 377
Query: 177 tcccttagtgtctctgggaaggagacttgcactttagaaaagatgcgttggatgaggtgt 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcccttagtgtctctgggaaggagacttgcactttagaaaagatgcgttggatgaggtgt 437
Query: 237 actgggaagactgctgatcctcgcctcctcttgggaaggaacctgccggagagagt-ggt 295
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 438 actgggaagactgctgaccctcgcctcctcttgggaaggaacctgccggagagagttggt 497
Query: 296 gttagaagcaggtagctgggcctcagatgtttccaggacccagaacaggctgcactgcct 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gttagaagcaggtagctgggcctcagatgtttccaggacccagaacaggctgcactgcct 557
Query: 356 ccctctacaccccctaatgcccccatctcctgaaggaaaatgttcttgtcccagctaatc 415
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ccctctacgccccctaatgcccccatctcctgaaggaaaatgttcttgtcccagctaatc 617
Query: 416 atttagagcgtcactctgcc 435
||||| ||||||||||||||
Sbjct: 618 atttacagcgtcactctgcc 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 837
Length adjustment: 9
Effective length of query: 426
Effective length of database: 828
Effective search space: 352728
Effective search space used: 352728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
