MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-438N19
Chromosome	6 (Build37)
Map Location	17,722,899 - 17,723,209
singlet/doublet	singlet
Overlap gene	St7
Upstream gene	Tcfec, EG435881, Tes, EG232599, Cav2, Cav1, Met, Capza2
Downstream gene	Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2
Link	Open Mouse BAC browser

Click to get alignment info.

name	Tcfec (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21426 MGI:1333760
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG435881 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:435881 MGI:3647813
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Tes (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21753 MGI:105081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG232599 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:232599 MGI:3647654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cav2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12390 MGI:107571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cav1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12389 MGI:102709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Met (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17295 MGI:96969
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capza2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12343 MGI:106222
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	St7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64213 MGI:1927450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Wnt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22413 MGI:98954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asz1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74068 MGI:1921318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC386426 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:386426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 24 Proteins pseudo : _no_value

name	LOC636450 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:636450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 132 ESTs, 10 Proteins pseudo : _no_value

name	LOC100040751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Cftr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12638 MGI:88388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cttnbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30785 MGI:1353467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcfec (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351379 GeneID:21426 MGI:1333760
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transcription factor EC transcript_id : NM_031198.2

name	Tes (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778927 GeneID:21753 MGI:105081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis derived transcript transcript_id : NM_011570.3

name	Tes (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778975 GeneID:21753 MGI:105081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : testis derived transcript transcript_id : NM_207176.3

name	EG232599 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803331 GeneID:232599 MGI:3647654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG232599 transcript_id : NM_177689.3

name	Cav2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131204 GeneID:12390 MGI:107571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caveolin 2 transcript_id : NM_016900.3

name	Cav1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893356 GeneID:12389 MGI:102709
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caveolin, caveolae protein 1 transcript_id : NM_007616.3

name	Met (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6678867 GeneID:17295 MGI:96969
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : met proto-oncogene transcript_id : NM_008591.1

name	Capza2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52345406 GeneID:12343 MGI:106222
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : capping protein (actin filament) muscle Z-line, alpha 2 transcript_id : NM_007604.2

name	St7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031951 GeneID:64213 MGI:1927450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Suppression of tumorigenicity 7 transcript_id : NM_022332.2

name	St7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032044 GeneID:64213 MGI:1927450
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Suppression of tumorigenicity 7 transcript_id : NM_001083315.1

name	Wnt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373092 GeneID:22413 MGI:98954
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : wingless-related MMTV integration site 2 transcript_id : NM_023653.4

name	Asz1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30231214 GeneID:74068 MGI:1921318
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat, SAM and basic leucine zipper domain containing 1 transcript_id : NM_023729.2

name	LOC100040751 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149254862 GeneID:100040751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001475182.1

name	Cftr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116008179 GeneID:12638 MGI:88388
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cystic fibrosis transmembrane conductance regulator homolog transcript_id : NM_021050.2

name	Cttnbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91982737 GeneID:30785 MGI:1353467
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cortactin binding protein 2 transcript_id : NM_080285.1

name	Tcfec (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13654264 CCDS:CCDS19920.1 GeneID:21426 MGI:1333760
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : transcription factor EC protein_id : NP_112475.1

name	Tes (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46395466 GeneID:21753 MGI:105081
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; testin; testin 2 product : testis derived transcript isoform 2 protein_id : NP_997059.1

name	Tes (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778928 CCDS:CCDS19921.1 GeneID:21753 MGI:105081
definition	GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; testin; testin 2 product : testis derived transcript isoform 1 protein_id : NP_035700.3

name	EG232599 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244128 GeneID:232599 MGI:3647654
definition	codon_start : 1 product : hypothetical protein LOC232599 protein_id : NP_808357.1

name	Cav2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18702317 CCDS:CCDS19923.1 GeneID:12390 MGI:107571
definition	GO_component : GO:0005901 - caveola [Evidence IPI]; GO:0016599 - caveolar membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0045121 - lipid raft [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0048471 - perinuclear region [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS] GO_process : GO:0006897 - endocytosis [Evidence TAS]; GO:0001937 - negative regulation of endothelial cell proliferation [Evidence IMP]; GO:0051259 - protein oligomerization [Evidence IDA] codon_start : 1 product : caveolin 2 protein_id : NP_058596.1

name	Cav1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680854 CCDS:CCDS19924.1 GeneID:12389 MGI:102709
definition	GO_component : GO:0005901 - caveola [Evidence TAS]; GO:0016599 - caveolar membrane [Evidence IDA] [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence ISS]; GO:0000139 - Golgi membrane [Evidence ISS]; GO:0000299 - integral to membrane of membrane fraction [Evidence IDA]; GO:0005887 - integral to plasma membrane [Evidence IDA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0048471 - perinuclear region [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0015485 - cholesterol binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0042632 - cholesterol homeostasis [Evidence ISS]; GO:0030301 - cholesterol transport [Evidence ISS]; GO:0006897 - endocytosis [Evidence TAS]; GO:0000188 - inactivation of MAPK activity [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0001937 - negative regulation of endothelial cell proliferation [Evidence IMP]; GO:0045019 - negative regulation of nitric oxide biosynthesis [Evidence IMP]; GO:0009968 - negative regulation of signal transduction [Evidence IDA]; GO:0045908 - negative regulation of vasodilation [Evidence IMP]; GO:0045907 - positive regulation of vasoconstriction [Evidence IMP]; GO:0051260 - protein homooligomerization [Evidence IDA]; GO:0051259 - protein oligomerization [Evidence IDA]; GO:0019217 - regulation of fatty acid metabolism [Evidence IMP]; GO:0019915 - sequestering of lipid [Evidence IMP]; GO:0006641 - triacylglycerol metabolism [Evidence IMP] codon_start : 1 note : caveolin, caveolae protein, 22 kDa; caveolin-1; caveolin 1 product : caveolin, caveolae protein 1 protein_id : NP_031642.1

name	Met (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678868 CCDS:CCDS19925.1 GeneID:17295 MGI:96969
definition	GO_component : GO:0009925 - basal plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005008 - hepatocyte growth factor receptor activity [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0000187 - activation of MAPK activity [Evidence IPI]; GO:0030534 - adult behavior [Evidence IMP]; GO:0007420 - brain development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0048012 - hepatocyte growth factor receptor signaling pathway [Evidence IDA]; GO:0007517 - muscle development [Evidence IMP] [Evidence IGI]; GO:0051450 - myoblast proliferation [Evidence IMP]; GO:0046777 - protein amino acid autophosphorylation [Evidence IDA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 exception : mismatches in translation note : HGF receptor; pulmonary adenoma resistance 4 product : met proto-oncogene protein_id : NP_032617.1

name	Capza2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671672 CCDS:CCDS19926.1 GeneID:12343 MGI:106222
definition	GO_component : GO:0008290 - F-actin capping protein complex [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence IEA]; GO:0051016 - barbed-end actin filament capping [Evidence IEA] codon_start : 1 note : capping protein alpha 2 product : capping protein (actin filament) muscle Z-line, alpha 2 protein_id : NP_031630.1

name	St7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134031952 CCDS:CCDS19927.1 GeneID:64213 MGI:1927450
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; family with sequence similarity 4, subfamily A, member 2; 4low density lipoprotein-related protein 12; low density lipoprotein-related protein 12 product : low density lipoprotein-related protein 12 isoform 1 protein_id : NP_071727.2

name	St7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134032045 GeneID:64213 MGI:1927450
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; family with sequence similarity 4, subfamily A, member 2; 4low density lipoprotein-related protein 12; low density lipoprotein-related protein 12 product : low density lipoprotein-related protein 12 isoform 2 protein_id : NP_001076784.1

name	Wnt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980721 CCDS:CCDS19928.1 GeneID:22413 MGI:98954
definition	GO_function : GO:0005102 - receptor binding [Evidence TAS] GO_process : GO:0007267 - cell-cell signaling [Evidence TAS]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 exception : mismatches in translation product : wingless-related MMTV integration site 2 protein_id : NP_076142.2

name	Asz1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30231215 CCDS:CCDS19929.1 GeneID:74068 MGI:1921318
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0004871 - signal transducer activity [Evidence NAS] GO_process : GO:0007281 - germ cell development [Evidence NAS] codon_start : 1 exception : mismatches in translation note : germ cell-specific ankyrin, SAM and basic leucine zipper domain containing protein product : ankyrin repeat, SAM and basic leucine zipper domain containing 1 protein_id : NP_076218.2

name	LOC100040751 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149254863 GeneID:100040751
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475232.1

name	Cftr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:14141185 CCDS:CCDS19930.1 GeneID:12638 MGI:88388
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ATP-binding cassette, subfamily c, member 7 product : cystic fibrosis transmembrane conductance regulator protein_id : NP_066388.1

name	Cttnbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91982738 GeneID:30785 MGI:1353467
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS] GO_function : GO:0005519 - cytoskeletal regulatory protein binding [Evidence ISS] GO_process : GO:0030036 - actin cytoskeleton organization and biogenesis [Evidence ISS] codon_start : 1 product : cortactin binding protein 2 protein_id : NP_525024.1

name	EG435881 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435881
definition	number : 1 pseudo : _no_value

name	EG435881 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435881
definition	number : 2 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:185655
definition	standard_name : BB107417

name	(CDS detail)
type	STS
link
xref	UniSTS:119792
definition	standard_name : RH94544

name	(CDS detail)
type	STS
link
xref	UniSTS:123097
definition	standard_name : 11.mHAa7h11.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130898
definition	standard_name : D6Mit347

name	(CDS detail)
type	STS
link
xref	UniSTS:109359
definition	standard_name : G54122

name	(CDS detail)
type	STS
link
xref	UniSTS:125856
definition	standard_name : X78990

name	(CDS detail)
type	STS
link
xref	UniSTS:167479
definition	standard_name : RH127026

name	(CDS detail)
type	STS
link
xref	UniSTS:494267
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:270638
definition	standard_name : PMC133690P2

name	(CDS detail)
type	STS
link
xref	UniSTS:270637
definition	standard_name : PMC133690P1

name	(CDS detail)
type	STS
link
xref	UniSTS:179338
definition	standard_name : AI447843

name	(CDS detail)
type	STS
link
xref	UniSTS:122668
definition	standard_name : 01.MMHAP69FLA1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:116588
definition	standard_name : D6Mit50

name	(CDS detail)
type	STS
link
xref	UniSTS:250447
definition	standard_name : AA946480

name	(CDS detail)
type	STS
link
xref	UniSTS:143867
definition	standard_name : Met

name	(CDS detail)
type	STS
link
xref	UniSTS:271185
definition	standard_name : PMC151835P1

name	(CDS detail)
type	STS
link
xref	UniSTS:390961
definition	standard_name : REN66161

name	(CDS detail)
type	STS
link
xref	UniSTS:116586
definition	standard_name : D6Mit157

name	(CDS detail)
type	STS
link
xref	UniSTS:142598
definition	standard_name : D6Nds3

name	(CDS detail)
type	STS
link
xref	UniSTS:164311
definition	standard_name : AI838057

name	(CDS detail)
type	STS
link
xref	UniSTS:301146
definition	standard_name : ECD20142

name	(CDS detail)
type	STS
link
xref	UniSTS:179337
definition	standard_name : AW208808

name	(CDS detail)
type	STS
link
xref	UniSTS:125308
definition	standard_name : MHAa74g5.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:389257
definition	standard_name : REN64457

name	(CDS detail)
type	STS
link
xref	UniSTS:389256
definition	standard_name : REN64456

name	(CDS detail)
type	STS
link
xref	UniSTS:142603
definition	standard_name : D6Rck2

name	(CDS detail)
type	STS
link
xref	UniSTS:144775
definition	standard_name : Wnt2

name	(CDS detail)
type	STS
link
xref	UniSTS:140776
definition	standard_name : G63878

name	(CDS detail)
type	STS
link
xref	UniSTS:140775
definition	standard_name : G63876

name	(CDS detail)
type	STS
link
xref	UniSTS:140871
definition	standard_name : G63879

name	(CDS detail)
type	STS
link
xref	UniSTS:140781
definition	standard_name : G63874

name	(CDS detail)
type	STS
link
xref	UniSTS:140873
definition	standard_name : G63880

name	(CDS detail)
type	STS
link
xref	UniSTS:140780
definition	standard_name : G63877

name	(CDS detail)
type	STS
link
xref	UniSTS:130782
definition	standard_name : D6Mit236

name	(CDS detail)
type	STS
link
xref	UniSTS:141329
definition	standard_name : Cftr

name	(CDS detail)
type	STS
link
xref	UniSTS:140869
definition	standard_name : G63881

name	(CDS detail)
type	STS
link
xref	UniSTS:140779
definition	standard_name : G63875

name	(CDS detail)
type	STS
link
xref	UniSTS:124104
definition	standard_name : 34.MMHAP67FLD4.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:140870
definition	standard_name : G63882

name	(CDS detail)
type	STS
link
xref	UniSTS:253408
definition	standard_name : CFTR

name	(CDS detail)
type	STS
link
xref	UniSTS:140872
definition	standard_name : G63883

name	(CDS detail)
type	STS
link
xref	UniSTS:141328
definition	standard_name : Cftr

name	(CDS detail)
type	STS
link
xref	UniSTS:124961
definition	standard_name : M60493

name	(CDS detail)
type	STS
link
xref	UniSTS:141327
definition	standard_name : Cftr

name	(CDS detail)
type	STS
link
xref	UniSTS:159481
definition	standard_name : AW495489

name	(CDS detail)
type	STS
link
xref	UniSTS:248399
definition	standard_name : AI045527

name	(CDS detail)
type	STS
link
xref	UniSTS:164310
definition	standard_name : AU040881

name	(CDS detail)
type	STS
link
xref	UniSTS:387052
definition	standard_name : REN62252

name	(CDS detail)
type	STS
link
xref	UniSTS:122994
definition	standard_name : 09.MMHAP76FRC9.seq

name	LOC386426 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254874 GeneID:386426
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 24 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase pseudo : _no_value transcript_id : XR_032736.1

name	LOC636450 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149254875 GeneID:636450
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 132 ESTs, 10 Proteins product : similar to CDK105 pseudo : _no_value transcript_id : XR_032748.1

clone name	MSMg01-475I21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-537H23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-294H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-053F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-091I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435H16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-527G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-438N19.T7 (MSMg01no438_n19.b1)	MSMg01-438N19.TJ (MSMg01no438_n19.g1)
ACC	AG529355	AG529356
length	726	787
length of high quality (start - end)	31 (77 - 107)	339 (74 - 412)
definition	CHROMAT_FILE: MSMg01no438_n19.b1 PHD_FILE: MSMg01no438_n19.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:04:47 2005	CHROMAT_FILE: MSMg01no438_n19.g1 PHD_FILE: MSMg01no438_n19.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 19:04:48 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NAAATTTGGGNNNNNNTNNNNNANTCCCNATTTTCCCNANATCCGCGNAA TTCAAANCTATCTCTCATACAGCAAACACTGGAGGATCCCAGNCAGGCTG GCGTGGACTACAATGCACAATCCCATTTGGNAAGTGTGTTGCACTCCAAA CTGANCACACACTGANATGNCTCTCNGAANCCTGNGCNNNNGATCCCCAC GCTTTCCTCCCGGAGAAAGCCANTTTTTTGGTGACCAGNTTCGTTCTTTA GGGTGCNGTTGGAGGTGATGTGGGGGGGGGGGGTGGGGTGGGGGGGGGCG GGTGTCGTGGGNNNNNNNNNTTNNTTTTNNNNNTNANNNAAAAANNNNNN NNNNNNNNTTTTTNTTTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNN NNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNTNNNNNNTN NTNNNNNNNNNNNNTTTNNNNNTTTNTNNNNNNTNNNNNNNNTNNNNNNN NNNNTNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNN TNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTNTNNNNNNNNTTNTTTTCT TCTTTTTTTTTTTTTTTTTTTTTTTG	CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXTCCAGGAGTGGGACTTTGTTTCATTTT TCTTTGCTTTGCTAATGTGTTAGATGAGGCTCTCTCTCTCTCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCACACAC ACACACACACAATGCCTTTAACTTTGTGATATGATGACTTCATTAACGTG CAGACTTTGTACTTTGAAAATGGATGAATGAGGGGTAGTGTAAGGAAAGG CAAGGCAGTGCCTCAGAGTCTCCAGATGAAGAGCTCCGTAGTGTTCATTA CTATACAAGAGTTATAGTATACTAAATAAGGACGTGGACTCACTTGCCTT GGCACTTGGTACTTACCTCTACCTGGCTTCTTACTTCTTTGGGACTTATT TCAAGCCCTGGTAGATGCCTAACAGTTGTGAAAAAGACTTATTGACAAGG GTTAGAAACGGCCCCAAATGCACTAAAACACAAGAAAATGGTAGTTGCTC ACTACAAATATCTAAATAGGATTTAATAGATTACCGCTTATGTCCTACAA GCTTCGCGAACTAGCTTGTTACCCCCATCATCCCTACTTTTATTTCTTTC TTCACATATATTTTTTTTCTGTTATTATCAATTCTACACTATAGGTGTGG TATGGCCTCAATACTACTAATAGACATTCGGAGCACATACTAGCCATACT CAGGCTAGCCATACTTATAACTTCCCAACTTCGCTTT
quality values	Open. Hide. 0 3 7 7 9 9 14 7 7 3 0 0 0 0 0 0 3 0 0 0 0 0 3 0 3 7 7 3 0 3 7 6 6 6 6 6 3 0 3 0 3 15 19 29 29 23 3 0 3 13 18 19 9 7 7 3 0 3 9 6 6 6 6 11 11 10 22 19 21 13 9 8 15 7 9 9 9 22 37 37 41 42 50 21 21 19 23 25 21 21 14 3 0 3 23 23 37 47 47 47 44 44 24 9 9 9 9 15 13 19 8 18 16 28 28 22 22 14 15 15 28 37 37 37 37 37 25 21 13 3 0 3 13 18 30 30 30 24 30 33 33 33 32 30 24 12 7 7 7 9 9 17 23 3 0 3 12 12 15 12 11 12 18 13 3 0 3 7 3 0 3 14 8 8 3 0 3 10 3 0 3 9 9 3 0 3 3 0 0 0 0 3 9 11 12 11 8 8 9 7 8 8 11 12 6 6 6 6 7 6 8 8 9 8 8 8 8 14 12 9 9 3 0 3 8 8 10 12 12 8 8 6 6 6 6 6 8 3 0 3 6 6 6 6 6 6 6 6 6 9 9 8 7 7 7 3 0 3 8 10 7 6 6 6 7 11 7 7 7 8 13 9 15 17 18 19 24 24 24 29 11 11 10 13 10 11 9 8 7 7 8 10 8 8 6 7 7 6 6 9 11 11 19 19 7 7 7 9 10 10 3 0 0 0 0 0 0 0 0 0 3 3 0 0 3 8 8 3 0 0 0 0 0 3 0 3 0 0 0 3 7 8 7 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 21 21 21 3 0 3 21 19 24 12 8 8 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 3 7 3 0 0 0 0 0 3 7 3 0 3 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 3 0 0 0 0 0 0 0 0 3 3 0 3 17 19 24 19 12 10 17 9 14 22 22 14 13 15 13 14 17 28 28 23 20 14 23 12 12 10 17 10 10 10 10	Open. Hide. 6 6 8 12 12 9 9 8 8 8 9 8 9 10 10 11 29 29 32 43 37 30 23 23 15 19 25 30 27 27 15 9 9 9 10 10 15 20 20 23 25 23 37 37 31 23 25 11 15 13 28 29 50 50 50 53 34 30 16 14 21 18 23 23 37 46 59 42 37 36 36 36 37 48 42 42 42 42 42 54 54 54 54 68 54 54 54 54 57 59 59 59 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 68 57 57 57 57 57 57 57 68 68 68 57 57 57 57 57 57 57 57 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 57 59 57 57 52 43 43 57 59 59 59 59 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 68 68 57 57 57 57 59 57 57 68 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 54 54 57 57 59 57 57 68 57 57 57 68 68 68 68 68 59 68 68 68 59 57 54 54 57 57 57 57 59 59 59 57 57 57 57 50 50 39 39 26 32 18 20 20 17 17 16 21 32 38 44 57 59 59 57 54 50 50 34 34 13 13 13 30 25 37 37 35 32 32 43 43 43 44 57 57 42 39 35 42 39 40 44 30 28 28 37 36 42 30 28 28 32 22 24 36 33 39 39 37 37 37 43 43 21 21 15 24 24 33 33 34 31 34 23 23 18 28 12 12 12 21 21 24 12 16 16 26 30 33 31 22 22 21 26 17 19 15 26 13 15 14 15 14 15 20 32 31 31 35 37 27 25 21 24 15 15 18 17 18 20 21 20 33 14 13 8 8 8 8 13 20 26 12 12 8 11 8 8 10 13 26 28 24 22 22 19 21 15 16 16 12 10 9 9 9 9 10 16 19 12 11 12 15 15 15 15 14 14 18 13 20 15 12 8 8 15 18 14 14 17 15 15 12 12 10 10 10 10 10 10 10 10 10 15 10 10 8 8 8 8 9 6 6 6 6 6 6 10 8 8 8 8 10 10 10 9 9 10 10 18 13 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 8 8 8 10 9 10 8 8 8 8 9 9 12 17 11 9 9 9 9 9 9 10 10 10 12 9 8 7 6 6 6 6 8 6 8 8 8 8 8 6 8 10 10 6 6 8 6 8 8 8 8 8 8 8 8 8 8 8 8 6 6 8 7 8 10 10 12 10 8 8 8 8 8 8 8 8 10 10 10 11 19 13 12 8 7 7 8 8 10 10 11 9 9 9 9 9 9 10 10 10 12 11 10 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 8 8 8 10 10 8 8 6 6 6 8 11 9 9 8 8 8 8 9 9 8 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 7 7 8 8 10 8 8 6 6 8 8 10 8 8 8 8 8 8 8 8 8 11 8 8 8 8 9 9 9 9 8 8 6 6 8 10 10 8 8 8 10 8 8 8 8 8 8 8 8 17 18 21 17 8 8 8 8 8 10 11 12 8 8 8 8 8 8 6 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no438_n19.g1 MSMg01no438_n19.g1 CHROMAT_FILE:
MSMg01no438_n19.g1 PHD_FILE: MSMg01no438_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:48 2005
         (339 letters)



>mm_chr6_17722671_17723409
          Length = 739

 Score =  460 bits (238), Expect = e-134
 Identities = 301/340 (88%), Gaps = 30/340 (8%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccaggagtgggactttgtttcatttttctttgctttgctaatgtgttagatgaggctct 60
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 229 tccaggagtgggactttgtttcattcttctttgctttgctaatgtgttagatgaggctct 288

                                                                       
Query: 61  ctctctctctctctctctctctctctctctctctctctttctctctctctctctctctct 120
           ||||||||||||||||||||||| | | | | |                           
Sbjct: 289 ctctctctctctctctctctctcacacacacac--------------------------- 321

                                                                       
Query: 121 cacacacacacacacacaatgcctttaactttgtgatatgatgacttcattaacgtgcag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 322 -acacacacacacacacaatgcctttaactttgtgatatgatgacttcattaacatgcag 380

                                                                       
Query: 181 actttgtactttgaaaatggatgaatgaggggtagtgtaaggaaaggcaaggcagtgcct 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 actttgtactttgaaaatggatgagtgaggggtagtgtaaggaaaggcaaggcagtgcct 440

                                                                       
Query: 241 cagagtctccagatgaagagctccgtagtgttcattact-atacaagagttatagtatac 299
           ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 441 cagagtctccagatgaagagctccgtagtgttcatta-tcatacaagagttatagtatac 499

                                                   
Query: 300 taaataaggacgtggactcacttgccttggcacttggtac 339
           ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 taaataaggacgtggactcacttgccttgtcacttggtac 539


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space:   240900
Effective search space used:   240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information