Query= MSMg01no443_i13.b1 MSMg01no443_i13.b1 CHROMAT_FILE:
MSMg01no443_i13.b1 PHD_FILE: MSMg01no443_i13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:10 2005
(138 letters)
>mm_chr6_134199035_134199571
Length = 537
Score = 221 bits (114), Expect = 2e-62
Identities = 132/138 (95%), Gaps = 1/138 (0%)
Strand = Plus / Minus
Query: 1 tgagttttctctgtcgaaatgacatagcaacacctgtctactaacaccccgatcccaatt 60
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 337 tgagttttctctgtcgaaatgacatagcaacacctgcctactaacacccc-atcccaatt 279
Query: 61 ctggcccctctcccttgtggaaagcagcgctgagctgctgtccacaggacaggattacag 120
|||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctggcccctctcccaaggggaatgcagcgctgagctgctgtccacaggacaggattacag 219
Query: 121 gcatgaatccgagaccaa 138
||||||||||||||||||
Sbjct: 218 gcatgaatccgagaccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 537
Length adjustment: 8
Effective length of query: 130
Effective length of database: 529
Effective search space: 68770
Effective search space used: 68770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no443_i13.g1 MSMg01no443_i13.g1 CHROMAT_FILE:
MSMg01no443_i13.g1 PHD_FILE: MSMg01no443_i13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:10 2005
(247 letters)
>mm_chr6_134014647_134015293
Length = 647
Score = 445 bits (230), Expect = e-129
Identities = 242/246 (98%)
Strand = Plus / Plus
Query: 1 ttcctgtgatatgctaggtattgcaattgccaatgtcactgtgactaatacttgacacaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 ttcctgtgatatgctaggtattgcaattgccaatgtcactgtgacaaatacttgacacaa 260
Query: 61 acaacttgagggaagaaacgtttgttagggcctggggtttcagaagtgtcatggttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaacttgagggaagaaacgtttgttagggcctggggtttcagaagtgtcatggttggaa 320
Query: 121 ctgtgtgacagggcagagcagtttggattgctgtagctgggaaccagagagcaggaatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtgtgacagggcagagcagtttggattgctgtagctgggaaccagagagcaggaatgt 380
Query: 181 gttgctggggcccacagcctatgggatgttgctgcctgaatccaggatgggttttccctt 240
| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggctggggctcacagcctatgggatgttgctgcctgaatccaggatgggttttccctt 440
Query: 241 caatct 246
||||||
Sbjct: 441 caatct 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
