Query= MSMg01no443_p16.b1 MSMg01no443_p16.b1 CHROMAT_FILE:
MSMg01no443_p16.b1 PHD_FILE: MSMg01no443_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:44 2005
(475 letters)
>mm_chr6_110902866_110903740
Length = 875
Score = 872 bits (451), Expect = 0.0
Identities = 469/475 (98%)
Strand = Plus / Minus
Query: 1 atctttaagattacatggcaatatataacaaaaatcaacgtgtggttgataaaccaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atctttaagattacatggcaatatataacaaaaatcaacgtgtggttgataaaccaaaag 454
Query: 61 accaaaaatgccatataaaagttatattttaacatctctattgattattatcagtatggt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 accaaaagtgccatataaaagttatattttaacatctctattgattattatcagtatggt 394
Query: 121 tatacatcaggtatgtagtaagttataatacttaggaacaaaagactgggatgggaagag 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 393 tatacatcaggtatgtagtaagttacaatacttaggaacaaaagactgggatgggaagag 334
Query: 181 atgaagaagagagataccaaggcagaatcagactatcacatatgtaatataagagaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgaagaagagagataccaaggcagaatcagactatcacatatgtaatataagagaaaat 274
Query: 241 accatggtagtttacctgaaatcaagagtatttgaatacataagtacttgttaataaacc 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 accatggtagattacctgaaatcaagagtatttgaatacataagtacttgttaataaacc 214
Query: 301 tgggagatagctgaacacccacatggtagataacaatcatttgtaaacactaggttatct 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgggagatcgctgaacacccacatggtagataacaatcatttgtaaacactaggttatct 154
Query: 361 agggccctcttctgacctccctcagtaccaggtacacttttggtaaatacatatacatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 153 agggccctcttctgacctccctcagtaccaggtacacttttggtaaatatatatacatgt 94
Query: 421 aggtaaaacacttttaaacatagaaaaaaataaattttatataaataagtctact 475
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aggtaaaacactcttaaacatagaaaaaaataaattttatataaataagtctact 39
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no443_p16.g1 MSMg01no443_p16.g1 CHROMAT_FILE:
MSMg01no443_p16.g1 PHD_FILE: MSMg01no443_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:11:44 2005
(426 letters)
>mm_chr6_110739404_110740229
Length = 826
Score = 801 bits (414), Expect = 0.0
Identities = 424/428 (99%), Gaps = 2/428 (0%)
Strand = Plus / Plus
Query: 1 tcattccatgcaactattgggaggaggcccttttcatggtgatacctatgaccctgcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tcattccatgcaactattgggaggaggcccttttcatggtgatacctatgaccctgcagg 258
Query: 61 ggg--ctgcttgagtacctttctaagatagtacctcagagcctggcagtggtggtgctgg 118
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gggggctgcttgagtacctttctaagatagtacctcagagcctggcagtggtggtgctgg 318
Query: 119 ccttttaatcccagcacttgggaggcagaggcaggtggatttctgagtttgaggccagcc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ccttttaatcccagcacttgggaggcagaggcaggtggatttctgagtttgaggccagcc 378
Query: 179 gggtctacagagtgagttctaggacagtttgggctacactgagaaacctgtctcaaaaaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gggtctacagagtgagttctaggacagtttgggctacactgagaaacctgtctcaaaaaa 438
Query: 239 aaaaaatattgtgtctcagttcagttctgtgaagagtggttcaagcgacagcaaggagag 298
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 439 aaaaaatattgtgtctcagttcagttctgtgaagagtggttcaagtgacagcaagaagag 498
Query: 299 aagaaaaccttctgtgatatgttctcaggagtcctatattgttcttctctcttgtgtact 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 aagaaaaccttctgtgatatgttctcaggagtcctatattgttcttctctcttgtgtact 558
Query: 359 aagccagtttggtaacttcagtacagactccatgagagggcaactgtaccctactttcca 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aagccagtttggtaacttcagtacagactccatgagagggcaactgtaccctactttcca 618
Query: 419 aaatggtg 426
||||||||
Sbjct: 619 aaatggtg 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
