Query= MSMg01no445_n04.b1 MSMg01no445_n04.b1 CHROMAT_FILE:
MSMg01no445_n04.b1 PHD_FILE: MSMg01no445_n04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:10 2005
(507 letters)
>mm_chr6_22877776_22878682
Length = 907
Score = 944 bits (488), Expect = 0.0
Identities = 505/518 (97%), Gaps = 12/518 (2%)
Strand = Plus / Plus
Query: 1 aagcggtcgatgtagtgtcagaataggaaaaatcaatgttgcttcactgttctcatgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aagcggtcgatgtagtgtcagaataggaaaaatcaatgttgcttcactgttctcatgtat 248
Query: 61 aatgataatctaaaaatctatggaaaatgggtttttattttgtaaacattgtaaaataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aatgataatctaaaaatctatggaaaatgggtttttattttgtaaacattgtaaaataat 308
Query: 121 ataagaacaaaaattatccacaattctgtctcatttgaaattgtttagttttctttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ataagaacaaaaattatccacaattctgtctcatttgaaattgtttagttttctttcttt 368
Query: 181 cattagtttgctcttacatcaataagtcgcaatttaaatccacaactattcacccgagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cattagtttgctcttacatcaataagtcgcaatttaaatccacaactattcacccgagct 428
Query: 241 tctttaaaatggagtttgataaaaagaattgcttgatcaaagggcttttataatttgtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tctttaaaatggagtttgataaaaagaattgcttgatcaaagggcttttataatttgtta 488
Query: 301 tataatattttttacattcatc------------cgaacaaacctttaaaagttatatta 348
|||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 489 tataatattttttacattcatcatgagatatagccgaacaaacctttaaaagttatatta 548
Query: 349 catattttcattccaacattttcactagtgctaattttaaaagttcaatgaaaatttagt 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 catattttcattccaacattttcactagtgctaattttaaaagttcaatgaaaatttagt 608
Query: 409 aaaaaaatcacatttttaaatattcattttccaaattatttgatttgtttagtcactcac 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaaaaaatcacatttttaaatattcattttccaaattatttgatttgtttagtcactcac 668
Query: 469 acaacagagactaagttatgttgttgcgggacatatga 506
|||||||||||||||||||||||||| |||||||||||
Sbjct: 669 acaacagagactaagttatgttgttgggggacatatga 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space: 445809
Effective search space used: 445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_n04.g1 MSMg01no445_n04.g1 CHROMAT_FILE:
MSMg01no445_n04.g1 PHD_FILE: MSMg01no445_n04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:14:10 2005
(440 letters)
>mm_chr6_23042047_23042886
Length = 840
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%)
Strand = Plus / Minus
Query: 1 tttaatttgggcgttttcttaggactgagctgtggtatagttcaagcatcctggaagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 tttaatttgggcgttttcttaggactgagctgtggtatagttcaagcatcctggaagggg 580
Query: 61 agagaggactgggaaccaaagcttctgaatctcttctccctctgttttcagcttgttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agagaggactgggaaccaaagcttctgaatctcttctccctctgttttcagcttgttgcc 520
Query: 121 ttatgtgcttcatcctgtggtggccaaagcctgcatcgaaagcagggttaatatggtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ttatgtgcttcatcctgtggtggccaaagcctgcatcgaaagcagggttaatatggtcac 460
Query: 181 tgcaagctacattacaccagccatgaaagaactggaaaagaggtaagccaccatctccag 240
||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 459 tgcaagctatattacaccagccatgaaagaactggaaaagaggtaagccaccgcctccag 400
Query: 241 taaggtgccacctcgggatcgttcctcttctgtgtctgacttttccattttcttcttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 taaggtgccacctcgggatcgttcctcttctgtgtctgacttttccattttcttcttttc 340
Query: 301 tacctgtggcagtgtggatgatgctggcattacagtcattggtgagttgggattagaccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tacctgtggcagtgtggatgatgctggcattacagtcattggtgagttgggattagaccc 280
Query: 361 tggtctcgatcacatgttggcaatggaaacaattgatactgccaaagagctgggagccac 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tggtcttgatcacatgttggcaatggaaacaattgatactgccaaagagctgggagccac 220
Query: 421 ggtgagcagatatcccctc 439
|||||||||||||||||||
Sbjct: 219 ggtgagcagatatcccctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
