XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATC
ACTAATTTACTAATAATCATTCAAAACTGTTTTGCAAGGGATAAATTTGC
TTGGGTGGCTCTGCTTGATTTTACTTTACTCTTTTTTATCTCTTGGCTCT
CCTAATAGAGCCCATAGAATCCATGCCAGTGACTTAGAGAAACCACTTAA
AAAAACAATTTAGAAAGCTGGAATCCAGCTCCATGGGTTTTTAAGACTCA
GTTTGTAAGACATGCTGTTTTCATTCAGTACTTGACCTACTTGGCTCCTT
GTGGTGTTGGCCCTTCTTTCTGATCTGTTGAGACATGGTTAGTGGCTTTA
GATTGTGTACCTTTCCCATTAGCTGGACAGACTTCCAAGCAGCACAATTG
TGAGATGCCAATCTTCAGATAGACCTGCCTTGAGAGCCATGTGTCCAGGA
CCAGCATGGACTGCTTAACTCTGTGTGCCCAGTGTAGATTGAACAGAACA
GACACAGATATGCAGAGGAAGTTTGTGGGTTATGTGGTGTGACCAATGAG
TTGTATTCCTAAACTTTAATCCACTTGCGTTTATTGAACCTTCTCTTTTC
TCTATCACTCATGTTTGAGCTTTGGTCTGAGAGACATGTTTAAACAGATT
ACTTCATCTTCAGTATACTCTACNAATGGCAATATTTTATATATATATAT
ATATATATATATATATATATATATATATTCCCATG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXTTTTGTTGAAGCTTGCATCTGAGTATCCTGTTTGA
GTTCTTAAATTTTTCATTTCTAGATTCTATCAGTTTGGGATTTCTTTATT
TATTTTATTTCTTCTTTCAGGTTTTGAACAATTTTATTCATTTTCTTCTA
CTGTTTGTATTTTCATCTATTTCTTTAAGGGATTTATTCATTTTATTTTT
AAAAACCTCTGTGATACTCATAAAGGGTATTTTAAGTTCTTTGTCTGTAC
TTCTCCATTCTTGTATTCACTCATGGCCTACTGAATAAGTTGCTGGAATC
TCGTGGGGACTAATTGTATTGGCTCTTAATGATTATTTTTCAATTTTATC
TCCAGGAATCAGGTTTTGGAAAGATTATAATTCTCTCTGTTCTTGTCTTT
ATTGGGTGGTTGTGTGTTCCTTTGTTTCTTTTGCCCTTTCTGCTTCTTAG
AATAGTGTGGTGGCTGTGTTCTGCCATTAGGATATTCTTCTGGAATTCTA
TCAGTTTGGGATTTCTTAATTTATTTAACCATAAAATGCTTTCCTAGGTA
TTCAGAAATGACACTTAGGAATTTGATGGGGTAGTAAGGTATCTTTATTT
GTTTTTTATAGGGAGGAAAGCTGGGTGGTCCATTAAAATCTTCTTCTCTC
CACAATGATTTCCTAAAGGGAAAGAACACAATTTGTTTGTT

Query= MSMg01no446_h11.b1 MSMg01no446_h11.b1 CHROMAT_FILE:
MSMg01no446_h11.b1 PHD_FILE: MSMg01no446_h11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:15:00 2005
         (636 letters)



>mm_chr6_9066319_9067354
          Length = 1036

 Score = 1178 bits (609), Expect = 0.0
 Identities = 627/633 (99%), Gaps = 2/633 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaatcactaatttactaataatcattcaaaactgttttgcaagggataaatttgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatcactaatttactaataatcattcaaaactgttttgcaagggataaatttgc 264

                                                                       
Query: 65  ttgggtggctctgcttgattttactttactcttttttatctcttggctctcctaatagag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgggtggctctgcttgattttactttactcttttttatctcttggctctcctaatagag 324

                                                                       
Query: 125 cccatagaatccatgccagtgacttagagaaaccacttaaaaaaacaatttagaaagctg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccatagaatccatgccagtgacttagagaaaccacttaaaaaaacaatttagaaagctg 384

                                                                       
Query: 185 gaatccagctccatgggtttttaagactcagtttgtaagacatgctgttttcattcagta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaatccagctccatgggtttttaagactcagtttgtaagacatgctgttttcattcagta 444

                                                                       
Query: 245 cttgacctacttggctccttgtggtgttggcccttctttctgatctgttgagacatggtt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttgacctacttggctccttgtggtgttggcccttctttctgatctgttgagacatggtt 504

                                                                       
Query: 305 agtggctttagattgtgtacctttcccattagctggacagacttccaagcagcacaattg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtggctttagattgtgtacctttcccattagctggacagacttccaagcagcacaattg 564

                                                                       
Query: 365 tgagatgccaatcttcagatagacctgccttgagagccatgtgtccaggaccagcatgga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagatgccaatcttcagatagacctgccttgagagccatgtgtccaggaccagcatgga 624

                                                                       
Query: 425 ctgcttaactctgtg-tgcccagtgtagattgaacagaacagacacagatatgcagagga 483
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgcttaactctg-gctgcccagtgtagattgaacagaacagacacagatatgcagagga 683

                                                                       
Query: 484 agtttgtgggttatgtggtgtgaccaatgagttgtattcctaaactttaatccacttgcg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 684 agtttgtgggttatgtggtgtgaccaatgagttgtattcctaaactttaatccacttgcc 743

                                                                       
Query: 544 tttattgaaccttctcttttctctatcactcatgtttgagctttggtctgagagacatgt 603
           |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 744 tttattgaaccttctcttttctctattactcatatttgagctttggtctgagagacatgt 803

                                            
Query: 604 ttaaacagattacttcatcttcagtatactcta 636
           |||||||||||||||||||||| ||||||||||
Sbjct: 804 ttaaacagattacttcatcttcggtatactcta 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)