Query= MSMg01no447_h02.b1 MSMg01no447_h02.b1 CHROMAT_FILE:
MSMg01no447_h02.b1 PHD_FILE: MSMg01no447_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:20 2005
(409 letters)
>mm_chr6_136143341_136144149
Length = 809
Score = 756 bits (391), Expect = 0.0
Identities = 402/407 (98%), Gaps = 4/407 (0%)
Strand = Plus / Minus
Query: 5 gaattccatactg--ttaccaatattgtttcagcaaactttctgatgcagtatttttcta 62
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 gaattccatactggcata--aatattgtttcagcaaactttctgatgcagtatttttcta 401
Query: 63 taatggggacgagagttcataggtcagcagggacttccccaacaagaaactgtgttgttc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 taatggggacgagagttcataggtcagcagggacttccccaacaagaaactgtgttgttc 341
Query: 123 tcttaacttggaagagattggtgtctgttcctgttggagaaaagagagaaacttaaaact 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tcttaacttggaagagattggtgtctgttcctgttggagaaaagagagaaacttaaaact 281
Query: 183 actataagacaatgggccttttctgaacaaagtggattattattgctctctatttccaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actataagacaatgggccttttctgaacaaagtggattattattgctctctatttccaat 221
Query: 243 gagatcttggtattccagttaattttctattgctgtgataagacaccatgactaaagcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gagatcttggtattccagttaattttctattgctgtgataagacaccatgactaaagcaa 161
Query: 303 cttataaaagaaaatatttaatttgagcttgtagtataaaaatgttagagtccatgatag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 cttataaaagaaaatatttaatttgagcttgtagtataaaaatgttagagtccatgatag 101
Query: 363 cagagcaaaggtgtgttgacaggagcagctgagagcttatgtcttaa 409
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cagagcaaaggtgtgttgacaggagcagctgagagcttatgtcttaa 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no447_h02.g1 MSMg01no447_h02.g1 CHROMAT_FILE:
MSMg01no447_h02.g1 PHD_FILE: MSMg01no447_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:21 2005
(275 letters)
>mm_chr6_135932119_135932793
Length = 675
Score = 532 bits (275), Expect = e-155
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 1 tttttgtgtttttacttgacgagtaactagtagacatctacacatgcattaatagtatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttgtgtttttacttgacgagtaactagtagacatctacacatgcattaatagtatac 260
Query: 61 aaattatgttttgaaatatgcatatgcatatatgcatcatagaatatttgggcatatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattatgttttgaaatatgcatatgcatatatgcatcatagaatatttgggcatatgta 320
Query: 121 tgtgcacacatgtatgcacagtgtatgcaaatgtgttgtagggtatgtatgtacatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcacacatgtatgcacagtgtatgcaaatgtgttgtagggtatgtatgtacatgtac 380
Query: 181 acatgtgtgtacaggaaagaggtcaacctcagatgccattattcagacagccatccagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgtgtgtacaggaaagaggtcaacctcagatgccattattcagacagccatccagtt 440
Query: 241 tgacttttgagaaagggtttgtcactggcctggaa 275
|||||||||||||||||||||||||||||||||||
Sbjct: 441 tgacttttgagaaagggtttgtcactggcctggaa 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 275
Length of database: 675
Length adjustment: 9
Effective length of query: 266
Effective length of database: 666
Effective search space: 177156
Effective search space used: 177156
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
