NCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTACCTTTGTACCAATTTTTTATAGGGTTATTTGGTT
CTCTGGAATCTAGCTTCTTGAGTTCTTTGTAAATATTAACTCTCTATTGG
ATATAGGATTGGTAAAGATCTTTTCCCAATATGTTGGTTGCCGTTTTGTC
CTATTGACAGTATAATTTGCCTTACAGATGCTTTGCAATTTTATGAGGTC
CCATTTATCAATTCTTGATCTTAAAGCATAATCCACTAGTGTTCTGTTCA
GGAACTTTCCCCCTGTGCCCATGTGTTTGAGGATCTTTGCCACATTATGT
TCTGTTAGGTTCCATGTATTTGGTTTTATTTGGAGGTTCCTGATCCACTT
AGATTGAGTTTTGTACAAGGAGATAAGAATGGGTTGATTTGCGTTTTTCT
CCATGCTGACCTCCAGTTGAACCAGAACCATTTGTTGAAAAGGCTGTCCT
TTTTCCGCTGGATGGTTTTAGCTCTTTTGTCAAAGATTAAGTGACCATAG
GTGTGTGACTTCATTCTACTAGCAGCTTGACAGCACATCTGAAATCTCTA
GAACAAAAAGAAGCAAATACATCCAAGCGGAGTAGACTGCAAGAAATAAT
CAAACTCAGGGCTGAAATCAACCAAGTAGGAACTAAAAGAACTATACNAA
GAATCAACAAAACCAGGAGCTGGTTCTTTGAGAAAATCAACAAG

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGCTGATGCCCATTTCTT
CTAGATTGACAAATTAGGGAAGGCTGGTCGTTAACCTTCTTTTTCATAGA
ACCTGGGGCTCTAAGGATGCATTTCTAAGTATCTATTTATCCGTCAGAAC
TGGAAGCTATTCATTTGGTATATGAGGAAAGGTAAGGCTCAGGAGGACAC
CTGACCTATCCTCAATGTCCCAAATTAATTAGTGGCTGAGCAGGGTATGA
GCAGGACTACAGACCTGTTGCAGACTAGCAAGGACAGGACGAGGGTTAAC
TGCGCGCGCGGGAGCCCTACCTCTTGCAGCACTCTCTTCATCTTCAGAAG
CAGCGTCTTCACTGCCGTGCACTCCTGGAGCATCAGTCTGAATGGCAGAG
AATCTATGCCTCCATTTTCCTCCACACCCTGCAGGGGCCAATCTGCAGAG
GGACTGTTGGGCATGCAGCTGACATGGGAACACCGGGCCTCTTGATCAGT
GTCTTTTGTTATTCTCAGGGAAAGGTTCCTAAGAAGAAATAAGATGAAAA
TAATTACCATTTGGTGTGCACAAAACGCCATCTCCTCTGGTGGCAATCAA
AATTAATATGACACTAAAGATTTCTTATGAAACTTGGCATTTTCTCCAAT
TAGTCTTTTAAAATTCTCCGACCCTTCGCCGAAAAATATGAATATTGGAT
TTTTGGTGGAG

Query= MSMg01no447_o12.g1 MSMg01no447_o12.g1 CHROMAT_FILE:
MSMg01no447_o12.g1 PHD_FILE: MSMg01no447_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:16:58 2005
         (481 letters)



>mm_chr6_61520251_61521131
          Length = 881

 Score =  845 bits (437), Expect = 0.0
 Identities = 449/455 (98%), Gaps = 4/455 (0%)
 Strand = Plus / Minus

                                                                       
Query: 27  tgacaaattagggaaggctggtcgttaaccttctttttcatagaacctggggctctaagg 86
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 tgacaaattagggaaggctggtcgttaaccttctttttcatagaacctggggctctaagg 822

                                                                       
Query: 87  atgcatttctaagtatctatttatccgtcagaactggaagctattcatttggtatatgag 146
           |||||||||||||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 atgcatttctaag----tatttatccgtcagaactggaagctattcatttggtatatgag 766

                                                                       
Query: 147 gaaaggtaaggctcaggaggacacctgacctatcctcaatgtcccaaattaattagtggc 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gaaaggtaaggctcaggaggacacctgacctatcctcaatgtcccaaattaattagtggc 706

                                                                       
Query: 207 tgagcagggtatgagcaggactacagacctgttgcagactagcaaggacaggacgagggt 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgagcagggtatgagcaggactacagacctgttgcagactagcaaggacaggacgagggt 646

                                                                       
Query: 267 taactgcgcgcgcgggagccctacctcttgcagcactctcttcatcttcagaagcagcgt 326
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 645 taactgcgcgcgcgggagccttacctcttgcagcactctcttcatcttcagaagcagcgt 586

                                                                       
Query: 327 cttcactgccgtgcactcctggagcatcagtctgaatggcagagaatctatgcctccatt 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cttcactgccgtgcactcctggagcatcagtctgaatggcagagaatctatgcctccatt 526

                                                                       
Query: 387 ttcctccacaccctgcaggggccaatctgcagagggactgttgggcatgcagctgacatg 446
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ttcctccacaccctgctggggccaatctgcagagggactgttgggcatgcagctgacatg 466

                                              
Query: 447 ggaacaccgggcctcttgatcagtgtcttttgtta 481
           |||||||||||||||||||||||||||||||||||
Sbjct: 465 ggaacaccgggcctcttgatcagtgtcttttgtta 431


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space:   410241
Effective search space used:   410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)