Query= MSMg01no448_b05.b1 MSMg01no448_b05.b1 CHROMAT_FILE:
MSMg01no448_b05.b1 PHD_FILE: MSMg01no448_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:12 2005
(249 letters)
>mm_chr6_65459171_65459819
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Plus
Query: 1 taagctgattttgcacagtcttccattacaaaatccttccttgagtttaaactgttatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagctgattttgcacagtcttccattacaaaatccttccttgagtttaaactgttatag 260
Query: 61 gcaagttgagtgattctctaacacttttaatgaggcaaatgaatgcttgtaggtattgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaagttgagtgattctctaacacttttaatgaggcaaatgaatgcttgtaggtattgtt 320
Query: 121 atggaatgaattctaaaatatatcattaaaccccccaaagcaagatgcaaaatgtttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggaatgaattctaaaatatatcattaaaccccccaaagcaagatgcaaaatgtttcta 380
Query: 181 ttttagcatgtcataaagttgacagactaaaaaggaaatttaatgatatgtactagtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttagcatgtcataaagttgacagactaaaaaggaaatttaatgatatgtactagtaat 440
Query: 241 aatttcagg 249
|||||||||
Sbjct: 441 aatttcagg 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no448_b05.g1 MSMg01no448_b05.g1 CHROMAT_FILE:
MSMg01no448_b05.g1 PHD_FILE: MSMg01no448_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:17:12 2005
(432 letters)
>mm_chr6_65593286_65594118
Length = 833
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Minus
Query: 1 attcttttatgcccaaactgtgagttagaccactttgagttcttagcagctgcgctttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 attcttttatgcccaaactgtgagttagaccactttgagttcttagcagctgcgctttcc 574
Query: 61 aaatgtgaaggatcagctggtcccagtggttagtttcctgtttactttgcctttagaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aaatgtgaaggatcagctggtcccagtggttagtttcctgtttactttgcctttagaggg 514
Query: 121 -acacacattggttcttgtagttcagctcaaggagaaggtcagattcaaacaggaatagt 179
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 513 tacacacattggttcttgtagttcagctcagggagaaggtcagattcaaacaggaatagt 454
Query: 180 cctgattataggaacattctcaagaagggagtcttaaaacatcttagagacaagacattt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cctgattataggaacattctcaagaagggagtcttaaaacatcttagagacaagacattt 394
Query: 240 gatttttttttttagagcatataccatcttggaaacgcttcagtaccagaaaaactgaac 299
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gattcttacttttagagcatataccatcttggaaacgcttcagtaccagaaaaactgaac 334
Query: 300 ctagagacaagattacagcaggctgagggtctcatgaccagaagtaacacagacattgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ctagagacaagattacagcaggctgagggtctcatgaccagaagtaacacagacattgat 274
Query: 360 gagactggcagctcatttttgaaatcccttagtgtctgtggccttgaaagcattccttaa 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagagtggcagctcatttttgaaatcccttagtgtctgtggccttgaaagcattccttaa 214
Query: 420 ggattttgttaag 432
|||||||||||||
Sbjct: 213 ggattttgttaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 833
Length adjustment: 9
Effective length of query: 423
Effective length of database: 824
Effective search space: 348552
Effective search space used: 348552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
