TCATAATTTGGGTGTTAAAAGAGCATATAGGTTCAACAACGCGGAATCTT
ACATGTTTTCCATGTACCCTAGAGAGTTGGTGAGTTCTCGGTCTAGTGAG
GACACTCACCTCTTACGAATAAAGAGGAATGCAGAAGAGGAGGAGACATT
CTGTGGATGTCTTATCTCCAGATAAATGTATACTCATGTGCATGGGTACA
TTATGACTGTGAAGCTATCCTGAGCTACATACACTGAAAACAAATATAGA
GAGCATCTTTCATCATCAGAATAGGTATAATAATTTACCAATTCTAATTC
ACTATAATGCATTATTTTTTTTAGCATATTACCATATGTATTTTGCTCCC
CAAATCATGAATTTATATATAGTCGTTTATTTTGGTACATAATATCCTTG
TCTTGAAGCCCATCTTTCACATTTATGATCTCTCCTGCCTTAGTTTCCCA
ACTATTTGAGACTTCACGTTTATATCTGCATGTCCATGTCCCATTTAGTG
ATTTTTCCTTTTGGTTTTATTTTTTCTATTTTCCTCCTCTCTTTTTTCTC
CTTCTTATCTCCCATTTTATTTTCCCTTTCTCACTTTCGCTTTTTTCTCC
TTTTGACCAATTTATCACTCCTTTTACTTTTTTTGCTTAATTTCCTCCAT
TATTATTTCCACCGCCTCCCCCTTCAAAATTCTACTAATTTTTTTCTTCC
CCCATTTTTCTTTCCCCCCTTTTCTTTCCCATTCCCCCTCTTTTTCCCTC
CTTTTTATCCTCCTCTCTACCTATCTATTAAC

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAAACATGCATACACACGT
GTGTACACACAGACACCTGCACACATAGAAATGCAGAGACATATACATGT
GCACACACATACTAATATGCATAGACACAAACACCCACAAATACATAAAT
ATAAAACAATTATACCACTTCAGAGTTTTGATGATAAACTTTGAAAAACA
AAGAGACTCCTTTCTCTCCATGTATAATCACAACTACGAGAGTCCTTTTC
AGGACAGTTCTAATCAGTGAAGTAGGAGTAGCTATTTCTACCATTCTGAT
TCCCTACCTATTATTCCAATGATCTGGCTGCACAAAGAGGAGGTGATAGA
AACACCCCTTCTGTCAATGATTTATGTACTCTTTGTATTGTGTTGAGATA
AAATCATCAGCATACTGTAGTACAAAGATGTGGGGCAGCTGAGGAGAGAT
TAGACTATAAGTTTAGATGCCCTGTAAGTGGGATCATCACACAACAGTTG
CCTGAAGAGCTTTGTGCATTTTTCTTTTGTTTGAGGACGTTGTGAGAAAA
AATCAATTGTGGAACAGCAAAGGCCCCCTTCCCGGAAAATAAAAAGCCGT
ATCTTGATTGGGGAATTAAACAGGCGCCCCCCCCGAAAAAAATTTCTGAC
TCTAAAACCAGTGAGTTCCCGGGATTTTGTCCCCCAGCCCCAATTCAAAA
AATATTCTATGGG

Query= MSMg01no448_n09.g1 MSMg01no448_n09.g1 CHROMAT_FILE:
MSMg01no448_n09.g1 PHD_FILE: MSMg01no448_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:18:15 2005
         (436 letters)



>mm_chr6_138723178_138724014
          Length = 837

 Score =  822 bits (425), Expect = 0.0
 Identities = 434/437 (99%), Gaps = 1/437 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaaaacatgcatacacacgtgtgtacacacagacacctgcacacatagaaatgcagagac 60
           ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 760 aaaaacatgcatacacatgtgtgtacacacagacacctgcacacacagaaatgcagagac 701

                                                                       
Query: 61  atatacatgtgcacacacatactaatatgcatagacacaaacacccacaaatacataaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 atatacatgtgcacacacatactaatatgcatagacacaaacacccacaaatacataaat 641

                                                                       
Query: 121 ataaaacaattataccacttcagagttttgatgataaactttgaaaaacaaagagactcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 ataaaacaattataccacttcagagttttgatgataaactttgaaaaacaaagagactcc 581

                                                                       
Query: 181 tttctctccatgtataatcacaactacgagagtccttttcaggacagttctaatcagtga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tttctctccatgtataatcacaactacgagagtccttttcaggacagttctaatcagtga 521

                                                                       
Query: 241 agtaggagtagctatttctaccattctgattccctacctattattccaatgatctggctg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agtaggagtagctatttctaccattctgattccctacctattattccaatgatctggctg 461

                                                                       
Query: 301 cacaaagaggaggtgatagaaacaccccttctgtcaatgattt-atgtactctttgtatt 359
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 460 cacaaagaggaggtgatagaaacaccccttctgtcaatgatttcatgtactctttgtatt 401

                                                                       
Query: 360 gtgttgagataaaatcatcagcatactgtagtacaaagatgtggggcagctgaggagaga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gtgttgagataaaatcatcagcatactgtagtacaaagatgtggggcagctgaggagaga 341

                            
Query: 420 ttagactataagtttag 436
           |||||||||||||||||
Sbjct: 340 ttagactataagtttag 324


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 837
Length adjustment: 9
Effective length of query: 427
Effective length of database: 828
Effective search space:   353556
Effective search space used:   353556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)