This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
Search Parameter
BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-449D23
Chromosome
6 (Build37)
Map Location
80,596,553 - 80,597,007
singlet/doublet
singlet
Overlap gene
none
Upstream gene
LOC100043392
,
Lrrtm4
Downstream gene
LOC100043390
,
LOC100042991
Link
Open Mouse BAC browser
Click to get alignment info.
name
LOC100043392
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043392
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
name
Lrrtm4
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:243499
MGI:2389180
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100043390
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043390
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA
name
LOC100042991
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100042991
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins
pseudo
: _no_value
name
LOC100043392
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149255264
GeneID:100043392
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
product
: hypothetical protein LOC100043392
transcript_id
: XM_001479622.1
name
Lrrtm4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141802856
GeneID:243499
MGI:2389180
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: leucine rich repeat transmembrane neuronal 4
transcript_id
: NM_178731.3
name
LOC100043390
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149255262
GeneID:100043390
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA
product
: similar to antigen LEC-A
transcript_id
: XM_001479609.1
name
LOC100043392
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149255265
GeneID:100043392
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001479672.1
name
Lrrtm4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:30520161
CCDS:CCDS20259.1
GeneID:243499
MGI:2389180
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0003674 - molecular_function [Evidence ND]; GO:0016740 - transferase activity [Evidence IEA]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
product
: leucine-rich repeat transmembrane neuronal 4 protein
protein_id
: NP_848846.1
name
LOC100043390
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149255263
GeneID:100043390
definition
codon_start
: 1
product
: similar to antigen LEC-A
protein_id
: XP_001479659.1
name
LOC100042991
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100042991
definition
number
: 1
pseudo
: _no_value
name
(CDS detail)
type
STS
link
xref
UniSTS:130668
definition
standard_name
: D6Mit127
name
(CDS detail)
type
STS
link
xref
UniSTS:130827
definition
standard_name
: D6Mit280
name
(CDS detail)
type
STS
link
xref
UniSTS:124483
definition
standard_name
: 43.MHAa98h7.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:130720
definition
standard_name
: D6Mit176
name
(CDS detail)
type
STS
link
xref
UniSTS:142575
definition
standard_name
: D6Abb1e
name
(CDS detail)
type
STS
link
xref
UniSTS:130953
definition
standard_name
: D6Mit5
name
(CDS detail)
type
STS
link
xref
UniSTS:130829
definition
standard_name
: D6Mit282
name
(CDS detail)
type
STS
link
xref
UniSTS:130945
definition
standard_name
: D6Mit4
name
(CDS detail)
type
STS
link
xref
UniSTS:130757
definition
standard_name
: D6Mit212
name
(CDS detail)
type
STS
link
xref
UniSTS:123487
definition
standard_name
: 20.MMHAP6FLG2.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:130828
definition
standard_name
: D6Mit281
name
(CDS detail)
type
STS
link
xref
UniSTS:122689
definition
standard_name
: 02.MHAa92a2.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:125079
definition
standard_name
: MHAa21b5.seq
name
(CDS detail)
type
STS
link
xref
UniSTS:124151
definition
standard_name
: 35.MMHAP64FLD5.seq
clone name
MSMg01-366L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-380D22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-407C01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-373F18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-189I10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-489M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235H21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-214F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-495A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-459P22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-364K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-414M18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-451G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108P18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-130O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-367H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376N07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-484I24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-460I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-379I05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-093D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-409C20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-347O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494L12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-191A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-316H17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-176K05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-451O09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-206M02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-331G05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-162N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436H05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-471O17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-509I11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-489K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-368A14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-214B24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351F10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-388D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-321H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455F18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-292P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-420O23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429O08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-450H15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-540E13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-447B10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458N24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-187E19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-466M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-322B19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-080O22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-083C07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-198J05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-449D23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072K22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-177F17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-135E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-331E01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-513F12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323E21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337B07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-097N12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-183K05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-336N11
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-344E21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125F10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-548D16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-415E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350B12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-235M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-143M04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-413N07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-339D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-272L10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-506D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408N08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430G01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-455A18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486O14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120L08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-271H22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-332B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-384E05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-046K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-448E23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-197M11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-329I02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-145H12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097C14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-241M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-068D07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-164J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-024J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-007P24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-028G07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-069M03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086A16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-045B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-235D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-299F13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332N23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034E04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-306E02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-290J16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104L02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-106K22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-192A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-187A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021E23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252K02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147B22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-049H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-325O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-328J10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001A22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-325F16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162H24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-154P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-113C06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-035P20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-308G18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-316K10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-255F01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341H24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-175I15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-100M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-314M15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-347P18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-124D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-198K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-227L12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-027P01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-165H11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-175G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-078C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-348L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034B13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243B01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-090B19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-218C15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332B17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340O14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-076N20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286B21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042J22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-072N01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-076D18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-066J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-090O06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-193N05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087G17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-126H01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252M07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087D01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-342G19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-096P18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-259G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-345M15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170D01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-271H18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-192J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026B15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-133I03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-295O12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252E03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-204P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-192G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-114L01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163P24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-186F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003M01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120E03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-094B17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-221O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-119O01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-178P20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201C16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-176P11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307O02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055L18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-185C14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-350J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-038E19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-248J19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-082L05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-313K04
singlet/doublet
doublet
plural/unique
unique