CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGAATCCGCGGAA
TTCTGAAGACTGACTATGAAAGAATGTAAAAATGTCTCAGAAACATTTTT
ATTAATTACATGTTGAAGGTTTTTTTTGTTTTTTTTGTTTTTTTTTGTTT
TTTGCTTTTCGAGACAGGGTTTTTCTGTGCAGTCCTGGCTGTCCTAGAAC
TCATCTTATAGACCAGGCTGGCCTTGAACATGAAGAGATCTGCCTGCCTC
TGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACTCCCCCTGCCACTC
CCCCCCCCAGCAATATTCCATTTTTATTAAGGCACAGATTCAACAATAAT
CTCATTTTCTTTTATCTTTCTTACTTGATGACTTAAGTTAAAATTATATA
TAGGGATCATATTATACCCTCGCTGGACAGTGCTGGTACTCATGGGTTTT
TTTTTTTTTTTTTTCTTGGCATCTTTCGATTTGTTTCAATCTTCTCCCGT
TTTTCTTTTTTTCATCTTCCCCTCTTACCTTTCCCCTTTTCTTACCTTTC
TTTACCTTTCCCTTATTTCTCCCTTTCTCCATTCCTTCCCTTTCTTCTCC
CTCCTTTCCCCCCCCCCCCACTTTCCCTTTACAACTTTTATTTTTTCTCT
TTCTACTCCTTTTTCCATTTTCAACATTCACTTATTTTCATTTTTTCTTC
TCCTTTCCCCCTTATCTTTCTCCCCTTCACTTCTTTTATCTCCCTATCCT
TTCCTTCTCTCCCTCTTTCCCTCCCCTTTCCCTCCCACCTTCTTCTCTTT
TCTCCTATCATTTTTATTCTCCCCCTTGTAAC

NCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCTGGGCATCGAGGGGGGAG
CAGCTCATAACCACCTGTAACTCCAACTTCAAGGGCCCAGTGTTCTCTTC
TGGACTGTTGTTGGCAGAAACATTAATACAAATACACATAAAAGAAAAAA
TATTAAATAAAAAAAGGAGGCGAGGAAATGGCTTGATCCTGACTGGCGAG
GGATCTAGCTTGAGAGACTTGGATTATCCCCAACCACAATCACCTCACGT
GGAGCTGTGTGGTGGGGTGGTGACGGTTACAGACAATCACCTCACGTGGA
GCTGTGTGGTGGGGTGGTGACGGTTACAGACAATCACCTCACGTGGAGCT
GTGTGGTGGGGTGGTGACGGTTACAGACAATCACCTCACGTGGAGCTGTG
TGGTGGGGTGGTGACGTTTACTGACCACCTCTCTCACGTGCAGCTGTGCG
GTGTTCCGCCTTATTTTTTCTTATATTCCCTTCTTCTTATATTTGTCCTT
TCCCTGCCTCTCTTTCTCTTCTCTCTTTTTCCTTCCATCATTTTTTATTT
CTTTTCTTTCTCCTTTCCCTCTATACCTTTTTTTTTTCCTCTCCCCCTCT
CTTTTTTTCTTGCCCGCTTCTTTTTTTCTTCTATTTTACTTTATACTCAC
CTTATCTTTTTTCCTTTCTCTGCTTTTTTATTTTATCCTTTACCCACTTC
TCCTTCCTCTCCATACCTTTCCCTTACTCTAGCTT

Query= MSMg01no450_d21.g1 MSMg01no450_d21.g1 CHROMAT_FILE:
MSMg01no450_d21.g1 PHD_FILE: MSMg01no450_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:20:05 2005
         (389 letters)



>mm_chr6_50232000_50232788
          Length = 789

 Score =  737 bits (381), Expect = 0.0
 Identities = 387/389 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttctgggcatcgaggggggagcagctcataaccacctgtaactccaacttcaagggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60  agttctgggcatcgaggggggagcagctcataaccacctgtaactccaacttcaagggcc 119

                                                                       
Query: 61  cagtgttctcttctggactgttgttggcagaaacattaatacaaatacacataaaagaaa 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 caatgttctcttctggactgttgttggcagaaacattaatacaaatacacataaaagaaa 179

                                                                       
Query: 121 aaatattaaataaaaaaaggaggcgaggaaatggcttgatcctgactggcgagggatcta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 180 aaatattaaataaaaaaaggaggcgaggaaatggcttgatcctgactggcgaaggatcta 239

                                                                       
Query: 181 gcttgagagacttggattatccccaaccacaatcacctcacgtggagctgtgtggtgggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcttgagagacttggattatccccaaccacaatcacctcacgtggagctgtgtggtgggg 299

                                                                       
Query: 241 tggtgacggttacagacaatcacctcacgtggagctgtgtggtggggtggtgacggttac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tggtgacggttacagacaatcacctcacgtggagctgtgtggtggggtggtgacggttac 359

                                                                       
Query: 301 agacaatcacctcacgtggagctgtgtggtggggtggtgacggttacagacaatcacctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 agacaatcacctcacgtggagctgtgtggtggggtggtgacggttacagacaatcacctc 419

                                        
Query: 361 acgtggagctgtgtggtggggtggtgacg 389
           |||||||||||||||||||||||||||||
Sbjct: 420 acgtggagctgtgtggtggggtggtgacg 448



 Score = 97.4 bits (50), Expect = 1e-24
 Identities = 50/50 (100%)
 Strand = Plus / Plus

                                                             
Query: 209 acaatcacctcacgtggagctgtgtggtggggtggtgacggttacagaca 258
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acaatcacctcacgtggagctgtgtggtggggtggtgacggttacagaca 552


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 3
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space:   296400
Effective search space used:   296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)