Query= MSMg01no453_a24.b1 MSMg01no453_a24.b1 CHROMAT_FILE:
MSMg01no453_a24.b1 PHD_FILE: MSMg01no453_a24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:48 2005
(633 letters)
>mm_chr6_12386870_12387903
Length = 1034
Score = 1112 bits (575), Expect = 0.0
Identities = 617/631 (97%), Gaps = 3/631 (0%)
Strand = Plus / Plus
Query: 5 gaattccttatcatattcccttcaaactaatagcacttccatctccaattgtatggtaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttatcatattcccttcaaactaatagcacttccatctccaattgtatggtaat 264
Query: 65 tgccaaaaaacatcaatgaaaataacttcaaatcaatttaatcatattcagctgtaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgccaaaaaacatcaatgaaaataacttcaaatcaatttaatcatattcagctgtaaaac 324
Query: 125 tatattttccagcattgtgtgccatgatattgctctccaaaaccact-aaaaaaatcaaa 183
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 tatattttccagcattgtgtgccatgatattgctctccaaaaccactaaaaaaaatcaaa 384
Query: 184 accactttgacccagagaaatcttaaaagttgtttggcttatgtgcacctgaaatggatg 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 accactctgacccagagaaatcttaaaagttgtttggcttatgtgcacctgaaatggatg 444
Query: 244 gaatagatgctagagaaagcttatgtgatcaaatgcagggagaatatgtaggcagagtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaatagatgctagagaaagcttatgtgatcaaatgcagggagaatatgtaggcagagtga 504
Query: 304 gctccagagataatatgttaatacttttgaagtctttatcctgagggtagaaataataag 363
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 505 gctccagagataatatgttaatacttttgaagtctttatcctgagggtaggaataataag 564
Query: 364 ataactgcacttggatttggatggacttgcaaatccagtagggggatggaaggagataag 423
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataactgcacttggatttggatagacttgcaaatccagtagggggatggaaggagataag 624
Query: 424 aagcacagaatgaaaataatagggtttggaaagtttaggattttaggcaaattaagttat 483
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 625 aagcacagaatgaaaataatagggtttggaaagtttagggttttaggcaaattaagttat 684
Query: 484 tgg-gaagtcaaaggtaagaatagtagatgcctaaaaataagaccactagtgtgtagtcc 542
||| || ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||
Sbjct: 685 tggaga-gtcaaaggtaagaatggtagatgcctaaaaatgagaccactagtatgtagtcc 743
Query: 543 tgtaatagcatgtttaactttgaaatctagagttgaaagtataaagaaacaacatgttca 602
||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 744 tgtaatagcctgtttaactttgaaatctagtgttcaaagtataaagaaacaacatgttca 803
Query: 603 ttcataatgaccacaatttcattatttccat 633
|| ||||||||||||||||||||||||||||
Sbjct: 804 tttataatgaccacaatttcattatttccat 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no453_a24.g1 MSMg01no453_a24.g1 CHROMAT_FILE:
MSMg01no453_a24.g1 PHD_FILE: MSMg01no453_a24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:48 2005
(624 letters)
>mm_chr6_12528815_12529838
Length = 1024
Score = 1143 bits (591), Expect = 0.0
Identities = 613/625 (98%), Gaps = 10/625 (1%)
Strand = Plus / Minus
Query: 1 atatattcacacctgcctttcacattgcttgtaaagcatttgtgtagtagagaatctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 atatattcacacctgcctttcacattgcttgtaaagcatttgtgtagtagagaa------ 825
Query: 61 attctctaatattaatagtttgtgggctaggaatgttgaagtattaagtgataaatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 824 --tctctaatattaatagtttgtgggctaggaatgttgaagtattaagtga-aaatcact 768
Query: 121 tgaaatgaagacagcatcaaaccctgacactatgtaaagtgctaaaaactaaaccctagc 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 tgaaatggagacagcatcaaaccctgacactatgtaaagtgctaaaaactaaaccctagc 708
Query: 181 tatgactgaggacatggtcgtttaaaagccctatttcatagtactaagaaacttagagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 tatgactgaggacatggtcgtttaaaagccctatttcatagtactaagaaacttagagtc 648
Query: 241 tctggttggttaggtagaatataaggcatggggggaaatgttcatgcttgaaccctgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tctggttggttaggtagaatataaggcatggggggaaatgttcatgcttgaaccctgtgc 588
Query: 301 atgataactagcattgggaaaattctttggctttacataaaccttacattggcttttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 atgataactagcattgggaaaattctttggctttacataaaccttacattggcttttaat 528
Query: 361 aaaatatgcaatttgcttccatgttcttacctttctctattgatcctttttaggacttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaaatatgcaatttgcttccatgttcttacctttctctattgatcctttttaggacttaa 468
Query: 421 cagtgtaagactctgagcctctctagggcaggcccactcaccaccattatgatatctttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 cagtgtaagactctgagcctctctagggcaggcccactcaccaccattatgatatctttt 408
Query: 481 acatgttaattgtttggttagcttatttatccattttcttgtacttatgcaaatgtacag 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 407 acatgttaattgtttggttagcttatttttccattttcttgtacttatgcaaatgtacag 348
Query: 541 tgatatcaaaatcaatgattgcatttcttttggaag-acacaacagattacacttccaga 599
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 347 tgatatcaaaatcaatgattgcatttcttttggaagaacacaacagattacacttccaga 288
Query: 600 cagaaagagagcttcgctgaattaa 624
|||||||||||||||||||||||||
Sbjct: 287 cagaaagagagcttcgctgaattaa 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
