Query= MSMg01no457_n09.b1 MSMg01no457_n09.b1 CHROMAT_FILE:
MSMg01no457_n09.b1 PHD_FILE: MSMg01no457_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:12 2005
(459 letters)
>mm_chr6_108454491_108455349
Length = 859
Score = 822 bits (425), Expect = 0.0
Identities = 434/437 (99%)
Strand = Plus / Minus
Query: 23 aggaggaactggaagcctaagcttacttatatttaagacctgtgaattcaaactgcaggt 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 aggaggaactggaagcctaagcttacttatatttaagacctgtgaattcaaactgcaggt 600
Query: 83 tccatggctcaatttgattttcacaagggaagggggaaggcgacttccggcttttgagca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 tccatggctcaatttgattttcacaagggaagggggaaggcgacttccggcttttgagca 540
Query: 143 tcatctactgttagattaacccagtagataacaagcttctaccagtttttgtcatctctt 202
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 539 tcatctactgttagattaacccagtagataacgagcttctaccagtttttgtcatctctt 480
Query: 203 gctatttcaggttctatttagagtgtcccacgagatgtcttggttacataacatgagcca 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gctatttcaggttctatttagagtgtcccacgagatgtcttggttacataacatgagcca 420
Query: 263 acgtggctaaaaatattgttctgtaaaacactcattaaaaaaaataaaacacccctattg 322
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 acgtggctaaaaatacagttctgtaaaacactcattaaaaaaaataaaacacccctattg 360
Query: 323 caaatgctgtcacattccgagtctccctcggatgtaaacaagcagggctacatgattcag 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 caaatgctgtcacattccgagtctccctcggatgtaaacaagcagggctacatgattcag 300
Query: 383 gacacttatataaaggagattttcttctttagaatagccaggagtgtagcccagctcaag 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gacacttatataaaggagattttcttctttagaatagccaggagtgtagcccagctcaag 240
Query: 443 aggaggtacctatgcag 459
|||||||||||||||||
Sbjct: 239 aggaggtacctatgcag 223
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_n09.g1 MSMg01no457_n09.g1 CHROMAT_FILE:
MSMg01no457_n09.g1 PHD_FILE: MSMg01no457_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:12 2005
(245 letters)
>mm_chr6_108261292_108261941
Length = 650
Score = 418 bits (216), Expect = e-121
Identities = 240/252 (95%), Gaps = 9/252 (3%)
Strand = Plus / Plus
Query: 1 tcttctgtcacctgcttcatgactctctgtagatgccatcacctcacagagaccccctcc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 tcttctgtcacctgcttcatgactctctgtagatgccatcacctcagagagaccccctcc 260
Query: 61 cttcctgtcctgtcacctttaaccctttagctgtttcgtggtgtttttaagaccccactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcctgtcctgtcacctttaaccctttagctgtttcgtggtgtttttaagaccccactc 320
Query: 121 -----ggagctctgcattttgtgttgcttcatttctagctttcctttcttctctatggaa 175
||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 cactcggagctctgcattttgtgttgcttcatttctagctttcctttcttctctatcgaa 380
Query: 176 tttatta--tgaatatgagagactatgcagagattgtgcccatcttggtcaccactgtgt 233
|||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttta--aggtggatatgagagactatgcagagattgtgcccatcttggtcaccactgtgt 438
Query: 234 cttttgtaccta 245
||||||||||||
Sbjct: 439 cttttgtaccta 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 650
Length adjustment: 9
Effective length of query: 236
Effective length of database: 641
Effective search space: 151276
Effective search space used: 151276
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
