Query= MSMg01no465_i20.b1 MSMg01no465_i20.b1 CHROMAT_FILE:
MSMg01no465_i20.b1 PHD_FILE: MSMg01no465_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:42 2005
(314 letters)
>mm_chr6_9329637_9330355
Length = 719
Score = 514 bits (266), Expect = e-150
Identities = 300/314 (95%), Gaps = 7/314 (2%)
Strand = Plus / Minus
Query: 5 gaattcataagtggccaactttgtctactctgtaactatcttatcccaggctttcctccc 64
||||||||||| || ||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 454 gaattcataagagggaaacattgtctactctgtaactatcttatcccaggttttcctccc 395
Query: 65 attggtgtagactaaatat-----cattgcaagagacctgactaaaaataaaagtaaaat 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 394 attggtgtagactaaatatcattgcattgcaagagacctgactaaaaataaaagtaaaat 335
Query: 120 agtagtaaaatgaa-attataaagcttcagagtttatttttaggaaataatcgtatgaaa 178
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 agtagtaaaattaaga-tataaagcttcagagtttatttttaggaaataatcgtatgaaa 276
Query: 179 aggatgggtgtaagcattcttatagacatcatttctttcaaatattgtcaataaacaagt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 aggatgggtgtaagcattcttatagacatcatttctttcaaatattgtcaataaacaagt 216
Query: 239 gattagtttaaaaccctcaggagattggaggccccagggagtggagaagtctgggagggt 298
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 215 gattagtttaaaaccctcaggagactggaggccccagggagtggagaagtctgggagggt 156
Query: 299 gagggtggggatga 312
||||||||||||||
Sbjct: 155 gagggtggggatga 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 719
Length adjustment: 9
Effective length of query: 305
Effective length of database: 710
Effective search space: 216550
Effective search space used: 216550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_i20.g1 MSMg01no465_i20.g1 CHROMAT_FILE:
MSMg01no465_i20.g1 PHD_FILE: MSMg01no465_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:42 2005
(452 letters)
>mm_chr6_9174343_9175197
Length = 855
Score = 801 bits (414), Expect = 0.0
Identities = 445/456 (97%), Gaps = 5/456 (1%)
Strand = Plus / Plus
Query: 1 tgtgtgagagtggataagcactgctgtcctgggtcactggcgtactttcgcatctgtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgtgagagtggataagcactgctgtcctgggtcactggcgtactttcgcatctgtctc 260
Query: 61 ttgcctctgtttggcatttgactctggctttaatgccaggatcctttcctctccctctat 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgcctctgttgggcatttgactctggctttaatgccaggatcctttcctctccctctat 320
Query: 121 gcttcagcctctatgcagaaggttccaggctaccattggatgcctgaagaacctcccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttcagcctctatgcagaaggttccaggctaccattggatgcctgaagaacctcccttg 380
Query: 181 atttgttaaccattttgaattgtgtcccaagaatgaacatgcaaaagtaatctttgatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttgttaaccattttgaattgtgtcccaagaatgaacatgcaaaagtaatctttgatgg 440
Query: 241 aattttaaatgcatccatttgtgtttctttctcaagaggccgcggtccc-gcacctgtcc 299
|||||||||||||||||||||||||||||||||||||||| || | ||| ||||||||||
Sbjct: 441 aattttaaatgcatccatttgtgtttctttctcaagaggctgcag-ccctgcacctgtcc 499
Query: 300 tctgctctgtaagtttgcagagtactgtgaacagagggctcatgaagggctgcatctttt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctgctctgtaagtttgcagagtactgtgaacagagggctcatgaagggctgcatctttt 559
Query: 360 tcttcaatgaatggtgtttccaggcatactaatttcattttcctgacctcactttaggaa 419
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttgaatgaatggtgtttccaggcatactaatttcattttcctgacctcactttaggaa 619
Query: 420 acatcatcaaaggt-a--atggtctttgttagtttg 452
|||||||||||||| | || ||||||||||||||
Sbjct: 620 acatcatcaaaggttatcatcatctttgttagtttg 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 855
Length adjustment: 10
Effective length of query: 442
Effective length of database: 845
Effective search space: 373490
Effective search space used: 373490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|