TAATTTGGGGGCGGTAAACGACTCTTTTTCCAGAGAGGATGGGNNGGAAT
TAAGGTTTACACCTAAACATGATAAAAGCAATCTACAGCAAACCAGTAGC
CAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAAATCAG
GGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAGTACTT
GAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGGATACA
AATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGATGATATGATAG
TATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCTAAACCTGATA
AACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAAACAAGTCAAT
GGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAGGGAAA
CAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCGTGACT
CTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCTCTGAA
GAAAGAAATTAAGGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCAT
GGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAGCAACC
TACCGATTCCATGCATTCCCCATCCAAATTTCCACTCAATTCTTCCACGG
ATTGGAAGGAGCCATTTGCATATTTGTCTTGGAA

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGTGAGTGGGGCATGGGAGAGGGGGCAACATT
TGGAATGTAATTAAGTAAAATAATTTAACAGTAGTAGTAGTAGTAATAAT
AATAATAATAATAATAATAATAATAAAGCCTGCAGTCCAGGACACCATAA
ACTGTGTAGGATATAGTTCCCCAGATGGGACAATCCTTTGTTATTAAGCT
TTTATACTTTCCCAAATGTCAAATGCTGATACCAATACCACAGAGACTGC
CACTAGTGCTGGAAATATTTAGCAAAAAGAAAAAAGAAAAATAGAAGAAT
AGAAGAATAGGCAATGAGGAAGGGTCAAGAGCTTGCTTACAGGGTTTCTG
CTCTAAGTCTTATTCATCATTTGTAATTGTTTTGGGGGGGGCTTAGAGAC
TTCTTATCATATTTTGTGGTTTGGTAACTAGTCATTGTCATATTCCTTGT
GCGTGACTTCCTATTTCCTGCCGCACGAGTTTATTCTCTGTCACTGAGAT
TGTTGATCCTTTTCCACCTCTTCATGGCTCTGGTGAAAAGGCTGCCGGAT
CCCCCTCTGCTCCCCTATGTCTACCCCAGTATGCGTTTTGCCTATTCCTT
GCCTATTTTTCTCTCGCTATTTTTTATTTTTTTTCCTCCCCCTGTTTTCT
CTTTGCCTTCTTGGCTCTGTCTTCTCCTTCTTC

Query= MSMg01no465_k02.g1 MSMg01no465_k02.g1 CHROMAT_FILE:
MSMg01no465_k02.g1 PHD_FILE: MSMg01no465_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:48 2005
         (448 letters)



>mm_chr6_111564570_111565420
          Length = 851

 Score =  677 bits (350), Expect = 0.0
 Identities = 435/488 (89%), Gaps = 40/488 (8%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgagtggggcatgggagagggggcaacatttggaatgtaattaagtaaaataatttaa 60
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 796 tgtgagtggggcatgggagagggggcaacatttggaatataattaagtaaaataatttaa 737

                                                                       
Query: 61  cagtagta------------------------------------g-tagtagtaataata 83
            |||| ||                                    | || || ||||||||
Sbjct: 736 tagtaataataataaatgatgatgatgatgatgatgatgatgatgataataataataata 677

                                                                       
Query: 84  ataataataataataataataataaagcctgcagtccaggacaccataaactgtgtagga 143
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 676 ataataataataataataataataaagcctgtagtccaggacaccataaactgtgtagga 617

                                                                       
Query: 144 tatagttccccagatgggacaatcctttgttattaagcttttatactttcccaaatgtca 203
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 616 tatagttccccagatgggacaatcctttgttattaggcttttatactttcccaaatgtca 557

                                                                       
Query: 204 aatgctgataccaataccacagagactgccactagtgctggaaatatttagcaaaaagaa 263
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aatgctgataccaataccacagagactgccactagtgctggaaatatttagcaaaaagaa 497

                                                                       
Query: 264 aaaagaaaaatagaagaatagaagaataggcaatgaggaagggtcaagagcttgcttaca 323
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaaagaaaaatagaagaatagaagaataggcaatgaggaagggtcaagagcttgcttaca 437

                                                                       
Query: 324 gggtttctgctctaagtcttattcatcatttgtaattgttttggggggg---gcttagag 380
            |||||||||||||| ||||||||||||||||||||||||| |||||||   ||||||||
Sbjct: 436 aggtttctgctctaactcttattcatcatttgtaattgtttggggggggtgggcttagag 377

                                                                       
Query: 381 acttcttatcatattttgtggtttggtaactagtcattgtcatattccttgtgcgtgact 440
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||
Sbjct: 376 acttcttatcatattttgtggtttggtaactagtcattgtcatattccttgtgtataact 317

                   
Query: 441 tcctattt 448
           ||||||||
Sbjct: 316 tcctattt 309


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 851
Length adjustment: 10
Effective length of query: 438
Effective length of database: 841
Effective search space:   368358
Effective search space used:   368358
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)