Query= MSMg01no465_l22.b1 MSMg01no465_l22.b1 CHROMAT_FILE:
MSMg01no465_l22.b1 PHD_FILE: MSMg01no465_l22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:58 2005
(387 letters)
>mm_chr6_20454055_20454841
Length = 787
Score = 671 bits (347), Expect = 0.0
Identities = 387/425 (91%), Gaps = 38/425 (8%)
Strand = Plus / Plus
Query: 1 actgatcgttacttttcttctctattagtgttcacagtctctaccagta----------- 49
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgatcgttacttttcttctctattagtgttcacagtctctaccagtattcacagtgtc 260
Query: 50 ---------------------------ttcacagtgtctaccagtgttcactgtatttac 82
|||||||||||||||||||||||||||||||||
Sbjct: 261 taccagtgttcactgtatttaccagtgttcacagtgtctaccagtgttcactgtatttac 320
Query: 83 cagtgttcgcagtatctaccagtgttctcagtatttgccagtattgtgaagcttaatagt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgttcgcagtatctaccagtgttctcagtatttgccagtattgtgaagcttaatagt 380
Query: 143 aagaaagaaacttccacctgagtaacagcttgatttctcaattttctatgactcaagtat 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagaaagaaacttccacctgagtaacagcttgatttctcaattttctatgactcaagtat 440
Query: 203 gtgtggcatcttcagcagtagggcctaactgtagagttctgaagagtcaccagtgtgact 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtggcatcttcagcagtagggcctaactgtagagttctgaagagtcaccagtgtgact 500
Query: 263 tgccaatagcatgtaatatttggagtgtatgggttctgtttggccaataactaagaagac 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgccaatagcatgtaatatttggagtgtatgggttctgtttggccaataactaagaagac 560
Query: 323 ataacttgctcctgagacagagctgtttaattatgaacatgtgtggtttaggatgttttt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataacttgctcctgagacagagctgtttaattatgaacatgtgtggtttaggatgttttt 620
Query: 383 tatgt 387
|||||
Sbjct: 621 tatgt 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no465_l22.g1 MSMg01no465_l22.g1 CHROMAT_FILE:
MSMg01no465_l22.g1 PHD_FILE: MSMg01no465_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:40:58 2005
(427 letters)
>mm_chr6_20617624_20618450
Length = 827
Score = 810 bits (419), Expect = 0.0
Identities = 425/427 (99%)
Strand = Plus / Minus
Query: 1 caggagaaatttgagaactaattcaaatatttaaatggatgttttaagtggtcagagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 caggagaaatttgagaactaattcaaatatttaaatggatgttttaagtggtcagagcat 568
Query: 61 tcaaatctctagttgagttagctgaatttactacaaaatcatttatggaaataaagtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcaaatctctagttgagttagctgaatttactacaaaatcatttatggaaataaagtagt 508
Query: 121 acacagatcaatagtttctcaaggggaaaatacatccttcttgaaataatataaatacct 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 507 acacagatcaatagtttctcaagaggaaaatacatccttcttgaaataatataaatacct 448
Query: 181 aatgggattttctatatgaaaaattttcgtcatctagattacagttgatttggtctcttt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aatgggattttctatacgaaaaattttcgtcatctagattacagttgatttggtctcttt 388
Query: 241 gttctgcagatccaaaagatgtattgaagaattgtcacatctatcttgtgagtaattggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttctgcagatccaaaagatgtattgaagaattgtcacatctatcttgtgagtaattggt 328
Query: 301 ggctattggaagcacaaatgtccacatacataatttaaactgatacatgctatatatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ggctattggaagcacaaatgtccacatacataatttaaactgatacatgctatatatttg 268
Query: 361 taagttaaatgagtgagaagaaaaatcaatttatcaatacttacatttgtacaaagactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 taagttaaatgagtgagaagaaaaatcaatttatcaatacttacatttgtacaaagactt 208
Query: 421 cttaaat 427
|||||||
Sbjct: 207 cttaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
