Query= MSMg01no469_p22.b1 MSMg01no469_p22.b1 CHROMAT_FILE:
MSMg01no469_p22.b1 PHD_FILE: MSMg01no469_p22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:45 2005
(433 letters)
>mm_chr6_111856720_111857552
Length = 833
Score = 675 bits (349), Expect = 0.0
Identities = 394/411 (95%), Gaps = 4/411 (0%)
Strand = Plus / Plus
Query: 27 gggtaacctgagaggagtcatactcctggtactctcagagaagcaaccagtatgatttaa 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 gggtaacctgagaggagtcatactcctggtactctcagagaagcaaccagtatgatttaa 282
Query: 87 gagatggtagtcttagaaagagacctgctggtcatagaagggaaggtcttcctgaaacca 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gagatggtagtcttagaaagagacctgctggtcatagaagggaaggtcttcctgaaacca 342
Query: 147 cagagggagctgatggctgaggaaccatgtaatgagtgtataaccatgccaggcaaatgg 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 343 cagagggagctgatggctgaggaaccatgtaatgagtgtataaccatgccaggcatatgg 402
Query: 207 agctccaaatatctatctatctatctatctatc----tatctatctatctatctatatat 262
|||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||
Sbjct: 403 agctccaaatatctatctatatatctatctatccatctatctatctatctatctatctat 462
Query: 263 atatatatatatatatatatatatatatagttatcacctaccccctcataatatcagaac 322
||| ||| ||| ||| ||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 463 ctatctatctatctatctatctatctatagttatcacctaccccctcataatatcagaac 522
Query: 323 taattgtgtccaactaaaccaaagatagggcaaaaagccataagtccctgactataggaa 382
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 523 taattgtgtccaactaaaccaaagatagggcaaaaagccataagtccctgacaataggaa 582
Query: 383 aagaatgaggtagatatacttacatgtagcacttctgatccctgataagta 433
|||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 583 aagaatgaggtagatatacttacatgtagcacttctgatcactgacaagta 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no469_p22.g1 MSMg01no469_p22.g1 CHROMAT_FILE:
MSMg01no469_p22.g1 PHD_FILE: MSMg01no469_p22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:46:45 2005
(426 letters)
>mm_chr6_112063654_112064479
Length = 826
Score = 816 bits (422), Expect = 0.0
Identities = 425/426 (99%)
Strand = Plus / Minus
Query: 1 atcattgttcagacatttagctttgctctcttagaggtatagaagtattttattttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atcattgttcagacatttagctttgctctcttagaggtatagaagtattttattttattt 567
Query: 61 tctttagcaaggttcaatgtgcttgccaaaatacaatagcgattgttagctaatcattac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctttagcaaggttcaatgtgcttgccaaaatacaatagcgattgttagctaatcattac 507
Query: 121 tgtgtgtgaagcagacaaaacctctttaaaatgaatgtaggtttgttctgcagcgacagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgtgtgtgaagcagacaaaacctctttaaaatgaatgtaggtttgttctgcagcgacagc 447
Query: 181 aattctgactcactgtttcctatcattttatggcagtggctgaagctaaagcttgactta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aattctgactcactgtttcctatcattttatggcagtggctgaagctaaagcttgactta 387
Query: 241 agcctttgttaatagctaagagaaaaccatccatatcacgagaacctctttcctagctgg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agcctttgttaagagctaagagaaaaccatccatatcacgagaacctctttcctagctgg 327
Query: 301 catgagtgtgagatctacaaagcttgtatgtcttgtctatgccatggttagttctaatcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 catgagtgtgagatctacaaagcttgtatgtcttgtctatgccatggttagttctaatcc 267
Query: 361 ttccctaccacaagcatctagatgcaatgttggaaagagctggctgagatcagtgtgggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttccctaccacaagcatctagatgcaatgttggaaagagctggctgagatcagtgtgggt 207
Query: 421 ttttat 426
||||||
Sbjct: 206 ttttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
