Query= MSMg01no472_b05.b1 MSMg01no472_b05.b1 CHROMAT_FILE:
MSMg01no472_b05.b1 PHD_FILE: MSMg01no472_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:35 2005
(565 letters)
>mm_chr6_7246894_7247860
Length = 967
Score = 1060 bits (548), Expect = 0.0
Identities = 558/562 (99%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 6 ggaattccttaccttcatgaagcgaattacaaatgacagtcattacctagtcaggaaaag 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattccttaccatcatgaagcgaattacaaatgacagtcattacctagtcaggaaaag 265
Query: 66 gcccgaggatgaagatcaaatggcaagatgttttaatatgtttgctttcaacatttctat 125
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gcccaaggatgaagatcaaatggcaagatgttttaatatgtttgctttcaacatttctat 325
Query: 126 a--tttttttaacaatgagagtacaatatatttaaaataaaacttcttaagtacaaatag 183
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atttttttttaacaatgagagtacaatatatttaaaataaaacttcttaagtacaaatag 385
Query: 184 tagaattttgaggattgtgccatgcaaattgttaagtagttaagtagtttagctgctagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagaattttgaggattgtgccatgcaaattgttaagtagttaagtagtttagctgctagg 445
Query: 244 ttacaatgaacctacaattaagatttaccaccataaatttatcagtcaatcatgatatag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttacaatgaacctacaattaagatttaccaccataaatttatcagtcaatcatgatatag 505
Query: 304 catttgagcatagtatgaatgcactagagtttaatttggaaatccatgagtaatttcaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 catttgagcatagtatgaatgcactagagtttaatttggaaatccatgagtaatttcaga 565
Query: 364 gatgattacaggttgcaacacattgtaagttgtcacttgccattgttaaaggggttggtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatgattacaggttgcaacacattgtaagttgtcacttgccattgttaaaggggttggtt 625
Query: 424 tctgattcaacattttgagagttctagggtataatgtacttttaaaatacttattaaaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tctgattcaacattttgagagttctagggtataatgtacttttaaaatacttattaaaat 685
Query: 484 attaaagctggattttgatattgccggactgaatcattctaattctatatagctttataa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 attaaagctggattttgatattgccggactgaatcattctaattctatatagctttataa 745
Query: 544 ggatgctttacttaaggagtat 565
||||||||||||||||||||||
Sbjct: 746 ggatgctttacttaaggagtat 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 967
Length adjustment: 10
Effective length of query: 555
Effective length of database: 957
Effective search space: 531135
Effective search space used: 531135
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no472_b05.g1 MSMg01no472_b05.g1 CHROMAT_FILE:
MSMg01no472_b05.g1 PHD_FILE: MSMg01no472_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:35 2005
(162 letters)
>mm_chr6_7445975_7446534
Length = 560
Score = 261 bits (135), Expect = 1e-74
Identities = 156/167 (93%), Gaps = 10/167 (5%)
Strand = Plus / Minus
Query: 1 gtgaatagattcttctactatggaatccataagcttatttctctagtttcattgtggcta 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtgaatagattc--ctactatggaatccataagcttatttctctagtttcattgtggcta 243
Query: 61 aacataaacttgtaatctagattctgtcacatagacaatacctatgtatatacgtatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aacataaacttgtaatctagattctgtcacatagacaatacctatgtatatacgtatgta 183
Query: 121 tnngtgtgtgc-----cantatacatatatatatatatgtatatata 162
| |||||||| || ||||||||||||||||||| ||||||||
Sbjct: 182 t--gtgtgtgcatataca-tatacatatatatatatatatatatata 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 560
Length adjustment: 8
Effective length of query: 154
Effective length of database: 552
Effective search space: 85008
Effective search space used: 85008
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
