Query= MSMg01no476_l07.b1 MSMg01no476_l07.b1 CHROMAT_FILE:
MSMg01no476_l07.b1 PHD_FILE: MSMg01no476_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
(238 letters)
>mm_chr6_108018255_108018892
Length = 638
Score = 445 bits (230), Expect = e-129
Identities = 236/238 (99%)
Strand = Plus / Minus
Query: 1 tgagctgggaatgtaggtcagtgatggagcatctgtgtagcacatgtttaagtctagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgagctgggaatgtaggtcagtgatggagcatctgtgtagcacatgtttaagtctagatt 379
Query: 61 gcattcctaacatccataacacacacacacatcctatatcactggtaccactagacagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gcattcctaacatccataacacacacacacatcctatatcactggtaccactagacagtc 319
Query: 121 tgggcaactttgaggcttgtctttaagcatgcggattatcttttctgagaatcagttttt 180
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 318 tgggcaactttgaggcttgtctttaagcatgtggattatcttttctgagaagcagttttt 259
Query: 181 tttttctttttcctatcagagagagctagcctcccaaaatgccaatattctataaact 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tttttctttttcctatcagagagagctagcctcccaaaatgccaatattctataaact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 638
Length adjustment: 9
Effective length of query: 229
Effective length of database: 629
Effective search space: 144041
Effective search space used: 144041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_l07.g1 MSMg01no476_l07.g1 CHROMAT_FILE:
MSMg01no476_l07.g1 PHD_FILE: MSMg01no476_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:54 2005
(244 letters)
>mm_chr6_107849732_107850376
Length = 645
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 3/246 (1%)
Strand = Plus / Plus
Query: 1 acaaaaacacaccaaatgcacataggaacttctccatttaaaaaaaaatgcaaaatcaca 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 acaaaaacacaccaaatgcacataggaacttctccatttaaaaaaaa-tgcaaaatcaca 259
Query: 61 attgaaacactgactgaccaaagggttttttttt-caatgtaaaaaagaaaggt-ttttt 118
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 260 attgaaacactgactgaccaaagggttttttttttcaatgtaaaaaagaaaggtattttt 319
Query: 119 tttaattctcataatggaaactgaggcttgcaaagttgcaaagatgttgtaagctacact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttaattctcataatggaaactgaggcttgcaaagttgcaaagatgttgtaagctacact 379
Query: 179 ttcctcatttctctctctctgttaaatcagtctcattttccataccagttctggtaaatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttcctcatttctctctctctgttaaatcagtctcattttccataccagttctggtaaatt 439
Query: 239 tagata 244
||||||
Sbjct: 440 tagata 445
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 645
Length adjustment: 9
Effective length of query: 235
Effective length of database: 636
Effective search space: 149460
Effective search space used: 149460
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
