Query= MSMg01no484_g17.b1 MSMg01no484_g17.b1 CHROMAT_FILE:
MSMg01no484_g17.b1 PHD_FILE: MSMg01no484_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:59 2005
(554 letters)
>mm_chr6_101159395_101160348
Length = 954
Score = 658 bits (340), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Minus
Query: 1 caaaggggaaagctgtcaacatatccactggagctctgactccatctgagagccactgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caaaggggaaagctgtcaacatatccactggagctctgactccatctgagagccactgaa 288
Query: 61 gaaaacacaaagccatttgccagttgggtgcccagttcaaaattcatatttaagctcgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gaaaacacaaagccatttgccagttgggtgcccagttcaaaattcatatttaagctcgct 228
Query: 121 ctgcctctaacctagtgcattccattctgtgtatgtgtttgcttatgtgcctgtgtgtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ctgcctctaacctagtgcattccattctgtgtatgtgtttgcttatgtgcctgtgtgtat 168
Query: 181 gtgtgtatgtttgtgtgtctctacatgtgcacatatggatgtgatatcagaaagcaacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 gtgtgtatgtttgtgtgtctctacatgtgcacatatggatgtgatatcagaaagcaacct 108
Query: 241 tgagtatcattcttcaagacacaagccatgttgggatgtggaggttggggagtgagactg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 tgagtatcattcctcaagacacaagccatgttgggatgtggaggttggggagtgagactg 48
Query: 301 antctcactggctcggatcttgctagtttggctaggtgagatatcca 347
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 agtctcactggctcggatcttgctagtttggctaggtgagatatcca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_g17.g1 MSMg01no484_g17.g1 CHROMAT_FILE:
MSMg01no484_g17.g1 PHD_FILE: MSMg01no484_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:59 2005
(385 letters)
>mm_chr6_101007331_101008115
Length = 785
Score = 545 bits (282), Expect = e-159
Identities = 317/332 (95%), Gaps = 9/332 (2%)
Strand = Plus / Plus
Query: 2 gtcagtggatatctaatccttagaaatcaccagatgagatgttataggaagggaaacccg 61
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 202 gtcagtggatatctaatccttagaaatcaccagatgagaagttataggaagggaaacccg 261
Query: 62 agtttctagagttggttctttaatacaattgaaggcaagagcaaacgagaagcatatttt 121
||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 262 agtttctagagttggttctttaatacaattgaaggcaagagaaaacgagaagtgtatttt 321
Query: 122 gatgacctcttgcctgtgagactgtgaagctctgttctgctgatgtgagaaagcatgtgt 181
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 322 gatgacctcttgcctgtgagactgtgaagctctgttctgctgatgtgagcaagcgtgtgt 381
Query: 182 ttctggtgctgtgttgtctggtctgattttggaaggtttgttctatacagctgcctcttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttctggtgctgtgttgtctggtctgattttggaaggtttgttctatacagctgcctcttt 441
Query: 242 ttgccttcttcttttatcatcataacctcctattccttcccctctctcctcccctcccct 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttgccttcttcttttatcatcataacctcctattccttcccctctctcctcccctcccct 501
Query: 302 -ctccctccccttcccccttccccttctccct 332
||||| |||||||| ||| |||||||
Sbjct: 502 tctccc---ccttcccc--tcc---tctccct 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
