TTCCTTCTTGGGTGCCCGCCAAATTGTTTCGTAAGCGACTCCTATGGTTC
ACAACGCGCGGAANCCATAGGCTTTTCCCTTAAAGGGCATTAGTGCAACC
GGGCTGATACCAATTAACGTCCCCTCTACTATAAAAGGGCCCAAAGAAAC
CAATTCAGGAAATTTCCTGGGTTTCCATGGTAATCGTCCACCCCGCGCTT
TTAAGACATGAACCTTTTTTTGTAATTTAATCTTCTGCAATAGAAACCAC
ATGGGCCCCTCCATTCTCCCTTGGGAAAAGAGCCCGCTTTTCAAAGAAAC
CTTATTTTTGAACGGGTCTCCTTTTTTGAAGAACACTCTTGTGAAAAATT
TTCGTCTCTCCTACTCCCGCTTTAAAATTTTTTTTTAGACATCGGCAGTA
CACCCTTTTTATCCTCCATCACCTTCTCACATATATCACCCTTGTTACAA
TTTATAATCAAGCTCTCTCCCCTCCCCCCTAGGGATAGGGAATTTTTTTA
TACTTTTTTACCACGGTTTTTCTGCTTTTTTTACTTGATTTCATTCTTTT
TTTTCTTTTTTTTTTATCTCTCCCATTAATCCAACCCTTCCTTGTTTCAC
GCTATTCCCCTTTTATGTCGGCGCTCCTTGTTTCTCATTTAATTTTTCAT

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTACTGGAAAAAAAAAAATGGGCAAAGGC
CAAACCTCTCAGACTCTGCTGGAGAAGCCAGGGAGCTATTATGTTTTCCT
AGGGAGCAGAAAATTAGTGTGAGACTGGGGGATGAAAAATATTTTGATTA
ATGATCGAGTCCTGCTGGTGACTGCGTCACCTTGGGCAAGTCACTTAATT
CAGCTTAATTGACTTTATTAACATAGACATATGACATATGATGACATAGT
GTGCGTATATAGGCAGCTTCTTCCTTTGCAATATATATAGAAAATAACGA
CGGTGACTATGTCAAAGGGTTTTGTGATTAACAACACAGGTTGAATCTGC
ATGTGCTTGATAGATATTATGGCTGTTGTTGCTATGCCCCTTTCATTACA
GAAAGAGAGTCAAGATTGGGGTAGCACCTCAGGGGTAGCAGGTGGCTTCC
AGTGGGGTTTTGTTTAAAAGGAGGTTTCAAGCTAACAAGACAAGTTGAAC
CAAGACATAAAGGAGGGGAGGAGGGCAAATGGCGATGGAGCCTAGAAAGT
CTGTGATGTAATTGCCGTGAGAGCCAAGGTCTCAGACCAGAATGAAAGCA
CATATTGGGTAAAACTGTGAGCAATGCTTGGCCGCACGAATAGCTCACTA
TTCCTTCCTACTCCGTACATGGTGCGAAAGAGTTAAACGTTTTTTCGGAG
GTGAGGGATGCGAAACCTCATGGG

Query= MSMg01no486_k22.g1 MSMg01no486_k22.g1 CHROMAT_FILE:
MSMg01no486_k22.g1 PHD_FILE: MSMg01no486_k22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:03 2005
         (562 letters)



>mm_chr6_135910095_135911056
          Length = 962

 Score = 1087 bits (562), Expect = 0.0
 Identities = 562/562 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttactggaaaaaaaaaaatgggcaaaggccaaacctctcagactctgctggagaagccag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 ttactggaaaaaaaaaaatgggcaaaggccaaacctctcagactctgctggagaagccag 882

                                                                       
Query: 61  ggagctattatgttttcctagggagcagaaaattagtgtgagactgggggatgaaaaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ggagctattatgttttcctagggagcagaaaattagtgtgagactgggggatgaaaaata 822

                                                                       
Query: 121 ttttgattaatgatcgagtcctgctggtgactgcgtcaccttgggcaagtcacttaattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ttttgattaatgatcgagtcctgctggtgactgcgtcaccttgggcaagtcacttaattc 762

                                                                       
Query: 181 agcttaattgactttattaacatagacatatgacatatgatgacatagtgtgcgtatata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 agcttaattgactttattaacatagacatatgacatatgatgacatagtgtgcgtatata 702

                                                                       
Query: 241 ggcagcttcttcctttgcaatatatatagaaaataacgacggtgactatgtcaaagggtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ggcagcttcttcctttgcaatatatatagaaaataacgacggtgactatgtcaaagggtt 642

                                                                       
Query: 301 ttgtgattaacaacacaggttgaatctgcatgtgcttgatagatattatggctgttgttg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ttgtgattaacaacacaggttgaatctgcatgtgcttgatagatattatggctgttgttg 582

                                                                       
Query: 361 ctatgcccctttcattacagaaagagagtcaagattggggtagcacctcaggggtagcag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ctatgcccctttcattacagaaagagagtcaagattggggtagcacctcaggggtagcag 522

                                                                       
Query: 421 gtggcttccagtggggttttgtttaaaaggaggtttcaagctaacaagacaagttgaacc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gtggcttccagtggggttttgtttaaaaggaggtttcaagctaacaagacaagttgaacc 462

                                                                       
Query: 481 aagacataaaggaggggaggagggcaaatggcgatggagcctagaaagtctgtgatgtaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 aagacataaaggaggggaggagggcaaatggcgatggagcctagaaagtctgtgatgtaa 402

                                 
Query: 541 ttgccgtgagagccaaggtctc 562
           ||||||||||||||||||||||
Sbjct: 401 ttgccgtgagagccaaggtctc 380


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space:   525504
Effective search space used:   525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)