NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCCCCAATCTCATGACTGGAAGACCTTCTTTGTAGTCATTGACTTC
AAAACCCAAGACTATTCCATGAGGATTAAATTTTTGTACTTTGAGAATGG
TGAATGCTATTTCCCAAAGCCTAAAGATCACTATGTACACACTTTTTATT
ATTTATTATTAAGTAGAGTATATCATAAACAGAAATGTGCTGGTAATATG
AAATCATGTTTTGGCAATGTACAGATGCCAAAATTAAACAATTAAAATGT
ATACAATAAATGGTAGCAATTTAAACTAAATATGGAAAGAAATAGTGCAC
ATTTACTGAGAATTAAACCAATAGATTTATAAACCAATACTTCAATATTT
TCAGATGCTACACTACTGTAATATTACTATAAATTTGCTCCTGAAATTAA
TGGTGTACATTTTTTTCAACAAGTTTGTATTTATAGTAATGAAAAGAGAA
AAAAATGCAATAGTATTTGAGTAAGTGATGGGGCAAAAACTCAGGGATAC
TCATTATTTTAAGGGTGGTTAGTTACTGTGATTCAGGAAGAAAGTGCTTA
GAATTGGATAAGTTGTATTTATTTTGATTACAGGTGTGACATATTTCCTA
TATGTACCTTTATTTGTTTCCCANTAACGAGTAAAAAATAGGTCTCTTTG
TTTCGACTGCTCATTGCAGACACCAGACGACATACTGGTTTTTCCACCNA
GGGAAACCTCAAGTGCACTTTCCATGCCATCCAGCTAGATGGTGT

CGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGTTCTGTGTCCCATTTTT
AATAGGGTTATTTGGTTCTCTTCTTTGGAAGCTGCCCCAGGACTCACATG
GACCTGGTATCACCTGGGAGGAAAGACAGGGCTGAGAAGAGAGGGGAACT
AGGTGGTCGAGAGAAAAGTAGAGCTAAGTCAAGATTCCTGATCAAAGCTC
AAATGTTTAATGGCAAATGTGCTTGTAAAGTGGGAGAGGGGAGGCCCATT
CACACCAATTCATTCTTGGAGCCTGGAACCAGCAGCAGGTGATGATGTGC
AGGATAGGGTGTAGTCTCTGGAATAGCTCAGTGTCCTCTCAGCATGTAGC
AGTGTCTTGAAGGAGAACAGCTGCAGTGTCTGAACAATAGAGTGATCTAG
GCAGGAAGGATCCATCTTTAGTGGCAGCAAGGTCAAGGTCTGGATCATCC
TGCTTCGAGGCTGGGGGAGGCTACACTCTGGAGTCTAATTTCTTGAATTA
TTTGTATATATTGGATATTAGCCCTCTATCAGATGTAGGATTGGTAAAGA
TCTTTTCCCAATCTGTTGGTTGCCAGTTTGTCCTATTGTCAGNATCCTTT
GCCTTACAAAAGCTTTACAACTTTATGAGATCTTCTTTGTAAATTGTTGA
TCTTAGAGCATAAGCCATTGATGTACTGTTCAGGAAAATTTTCCTGTATT
CATGTTGGCCAGGCAGTTCAGTAAGTCTACAGGTCCCTCCCCACAGAGAC
AAGATTC

Query= MSMg01no487_h21.b1 MSMg01no487_h21.b1 CHROMAT_FILE:
MSMg01no487_h21.b1 PHD_FILE: MSMg01no487_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:07 2005
         (558 letters)



>mm_chr6_20444535_20445491
          Length = 957

 Score = 1035 bits (535), Expect = 0.0
 Identities = 550/555 (99%), Gaps = 1/555 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcccccaatctcatgactggaagaccttctttgtagtcattgacttcaaaaccca 63
           ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccccaatcacattactggaagaccttctttgtagtcattgacttcaaaaccca 263

                                                                       
Query: 64  agactattccatgaggattaaatttttgtactttgagaatggtgaatgctatttcccaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agactattccatgaggattaaatttttgtactttgagaatggtgaatgctatttcccaaa 323

                                                                       
Query: 124 gcctaaagatcactatgtacacactttttattatttattattaagtagagtatatcataa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcctaaagatcactatgtacacactttttattatttattattaagtagagtatatcataa 383

                                                                       
Query: 184 acagaaatgtgctggtaatatgaaatcatgttttggcaatgtacagatgccaaaattaaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagaaatgtgctggtaatatgaaatcatgttttggcaatgtacagatgccaaaattaaa 443

                                                                       
Query: 244 caattaaaatgtatacaataaatggtagcaatttaaactaaatatggaaagaaatagtgc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caattaaaatgtatacaataaatggtagcaatttaaactaaatatggaaagaaatagtgc 503

                                                                       
Query: 304 acatttactgagaattaaaccaatagatttataaaccaatacttcaatattttcagatgc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acatttactgagaattaaaccaatagatttataaaccaatacttcaatattttcagatgc 563

                                                                       
Query: 364 tacactactgtaatattactataaatttgctcctgaaattaatggtgtacatttttttca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 564 tacactactgtaatattactataaatttgctcctgaaattaatggtgtacatttttttcc 623

                                                                       
Query: 424 acaagtttgtatttatagtaatgaaaagagaaaaaaatgcaatagtatttgagtaagtga 483
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 624 acaagtttgtatttatagtaatgaaaagagaaaaaa-tgcaatagtatttgagtaagtaa 682

                                                                       
Query: 484 tggggcaaaaactcagggatactcattattttaagggtggttagttactgtgattcagga 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tggggcaaaaactcagggatactcattattttaagggtggttagttactgtgattcagga 742

                          
Query: 544 agaaagtgcttagaa 558
           |||||||||||||||
Sbjct: 743 agaaagtgcttagaa 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 957
Length adjustment: 10
Effective length of query: 548
Effective length of database: 947
Effective search space:   518956
Effective search space used:   518956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)