TTTATGTGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAGG
ATCCGCGGAATTCACACCTGTTTCTAGAGGAACTAGTTCCGTCCATGTCT
ACGGAGGGCCACCAGATGGAGCTCTTTTACACTCTATCCTTGATTGCCTA
ACCAGGTTATCTAGGCTTCCTAGTTCCACCACAATGCTGAGACACAGACT
CAATAGGGACCTTACTAACCTTACATTTTAATATGAGAATGTATAGATCA
GGAAGGTTTTTCTACTGCAGGAAAAATCTTCCACATATAATCTTATGCCT
CATCATCTTACTCTGCAGTTTCCTCAAGCTGATTAGCCAGAGAATAAAAC
CATCCAAGTAGAGGGACTGGGATGGAATTACTTGTCTACCATACACAAAC
CTCCTGGACCCAACCCTTACCCACAACCCCAAGTTCCATGAACAGAGACC
GAGATGAGAACAGCTGCATCCAAAATCCAACATCTGTCCATCTCTCTCTC
CTTCACAGTCTGGGTGAGCAATGCTAAGGCTCTCCTCCACCCCAGCTCAG
CCACAGCTCTCAAGCTGAGAATAACGGAATGTGTGACTGAATCATTCTAG
AACTGACTTAAGCAGCCCCAGTCCACCTGTTTTCCCCAAGGAACAAAACA
AAACTGCTTCCTGTTCTTTGTGTCTAAATCCAGCTAGCTAAATTCCTTGT
GTGGAAAACCATAATACTTATGTACAG

NTCCACCATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTTGCTATCCCTGGGAGGCCTGT
TCTTTTCTAAAGGGAAATGGGAGCAATTGGTTTGGGGGAGAAGGATGGTG
ATGGTGGTGGGGTACTTTATTTTCTCTTTTCCTCCTTTTTTCCCCCCCCC
TCCCTCTCCCCCCCCCTTTTTCCCTCCCCTTTCCCCCCCCCCCCCCCCCC
TTCTTTTCCTCCCCCCCCTCCCCCCCCCCGCGCCCCCCCCCTTTTCCCCC
CCCCTCCCCCCCTCTCTTTTTTTCCTCCCCCCCCGCCCCCCCNGGCTATT
TCCCTTCTGTCCCCCCCCCTCTCCCCCCCCTCCCCCCCCCCCTCTTTCTT
TTTTCTCCTTTTCCCCCCCCTCCCCCCCCCCCCCCACCTTTTCCCCCCTT
CCTCCCTTCCCCCCCCCCCCCTTTTCTTCTCCCCCTCCCCCCCCCCCTCC
CCTTCTCCCTCCACCCCCCTCCCCCCCCCCCTTCCCCCCCCCCCCCCCTC
CCTCCCCCCCCCCTCCCCCTCCTCTCCCCCCCCCTCCTCTTTCTCCCCTC
TTTCCCCCCCCCCCCCTCTTCTCTCTCCCCCTCCCCCCCCCCCCCCCCCC
TTTCCTTTCACCTCACCTCCCTCCCTCCCCCCTTTTTTTCTCCCCCCCCC
CTCCCCCCCCCCCCTTCTCTCCTCCCCCCCTCCACACCCCTTCCCCCCCC
CTATATTCTCCCCCCCCCCTCTCTTCTTTGTT

Query= MSMg01no487_j01.b1 MSMg01no487_j01.b1 CHROMAT_FILE:
MSMg01no487_j01.b1 PHD_FILE: MSMg01no487_j01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:13 2005
         (639 letters)



>mm_chr6_137695489_137696527
          Length = 1039

 Score = 1205 bits (623), Expect = 0.0
 Identities = 632/635 (99%), Gaps = 2/635 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattcacacctg-tttctagaggaactagttccgtccatgtctacggagggccaccaga 62
           ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gaattcacacctgcttt-tagaggaactagttccgtccatgtctacggagggccaccaga 779

                                                                       
Query: 63  tggagctcttttacactctatccttgattgcctaaccaggttatctaggcttcctagttc 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tggagctcttttacactctatccttgattgcctaaccaggttatctaggcttcctagttc 719

                                                                       
Query: 123 caccacaatgctgagacacagactcaatagggaccttactaaccttacattttaatatga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 caccacaatgctgagacacagactcaatagggaccttactaaccttacattttaatatga 659

                                                                       
Query: 183 gaatgtatagatcaggaaggtttttctactgcaggaaaaatcttccacatataatcttat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gaatgtatagatcaggaaggtttttctactgcaggaaaaatcttccacatataatcttat 599

                                                                       
Query: 243 gcctcatcatcttactctgcagtttcctcaagctgattagccagagaataaaaccatcca 302
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 598 gcctcatcatcttactctgcagtttcctcaagctgagtagccagagaataaaaccatcca 539

                                                                       
Query: 303 agtagagggactgggatggaattacttgtctaccatacacaaacctcctggacccaaccc 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agtagagggactgggatggaattacttgtctaccatacacaaacctcctggacccaaccc 479

                                                                       
Query: 363 ttacccacaaccccaagttccatgaacagagaccgagatgagaacagctgcatccaaaat 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ttacccacaaccccaagttccatgaacagagaccgagatgagaacagctgcatccaaaat 419

                                                                       
Query: 423 ccaacatctgtccatctctctctccttcacagtctgggtgagcaatgctaaggctctcct 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccaacatctgtccatctctctctccttcacagtctgggtgagcaatgctaaggctctcct 359

                                                                       
Query: 483 ccaccccagctcagccacagctctcaagctgagaataacggaatgtgtgactgaatcatt 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 ccaccccagctcagccacagctctcaagctgagaataacggaatgtgtgactgaatcatt 299

                                                                       
Query: 543 ctagaactgacttaagcagccccagtccacctgttttccccaaggaacaaaacaaaactg 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 ctagaactgacttaagcagccccagtccacctgttttccccaaggaacaaaacaaaactg 239

                                              
Query: 603 cttcctgttctttgtgtctaaatccagctagctaa 637
           |||||||||||||||||||||||||||||||||||
Sbjct: 238 cttcctgttctttgtgtctaaatccagctagctaa 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space:   647241
Effective search space used:   647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)