Query= MSMg01no487_o11.b1 MSMg01no487_o11.b1 CHROMAT_FILE:
MSMg01no487_o11.b1 PHD_FILE: MSMg01no487_o11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:39 2005
(663 letters)
>mm_chr6_61633258_61634320
Length = 1063
Score = 1218 bits (630), Expect = 0.0
Identities = 653/662 (98%), Gaps = 3/662 (0%)
Strand = Plus / Plus
Query: 1 cttccttaacgtgctgattttctgcactcatgtgaatggtcatagcttgttcatgaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccttaacgtgctgattttctgcactcatgtgaatggtcatagcttgttcatgaaata 260
Query: 61 ggaataaacatttagcagagatagaaagctggcataagatcatttgttcattctgttagt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 ggaataaacatttagcagagatagaaagctggcataagatcatttgttcattctgttact 320
Query: 121 atctgtaaccatgtgcctttgtcatcgtcacctttgtcatcattgtctcatcatcattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atctgtaaccatgtgcctttgtcatcgtcacctttgtcatcattgtctcatcatcattac 380
Query: 181 cattatcactaccacatcatcatcttcttcattattctctgttctccatcctcttatctc 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactatcactaccacatcatcatcttcttcattattctctgttctccatcctcttatctc 440
Query: 241 catagtccataggacatttattctttccaatgacactcatttaaagtgtaccatgattat 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catagtccataggacattttttctttccaatgacactcatttaaagtgtaccatgattat 500
Query: 301 ctggtagaagatagggattcaaaaatacctgggaataactttatgaaagaaattgattga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtagaagatagggattcaaaaatacctgggaataactttatgaaagaaattgattga 560
Query: 361 tttgtacaataaaattggcaagcttacagttgcctgtaagcatggcttaatgaactctta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgtacaataaaattggcaagcttacagttgcctgtaagcatggcttaatgaactctta 620
Query: 421 acactcagacctaagcccttcctgttgcctttattcagtttactgactgcaagcaactat 480
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 621 acactcagacctaagcccttcctgttgccttcattcagtttactgactgcaagcaactat 680
Query: 481 tttaacattcatcacatagaatttaatactgggttttgatgtcattgacacaggttcaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttaacattcatcacatagaatttaatactgggttttgatgtcattgacacaggttcaaa 740
Query: 541 tgaatatactactgtgtttccgtatgcataagacttaactgggctaattttgtagagttt 600
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 741 tgaatatactattgtgtttccgtatgcaaaagacttaactgggctaattttgtagagttt 800
Query: 601 tgctttttttttttttaatttactttttgagattatagtttaattacatttctactttcc 660
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgctttttttttt---aatttactttttgagattatagtttaattacatttctactttcc 857
Query: 661 tg 662
||
Sbjct: 858 tg 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_o11.g1 MSMg01no487_o11.g1 CHROMAT_FILE:
MSMg01no487_o11.g1 PHD_FILE: MSMg01no487_o11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:39 2005
(668 letters)
>mm_chr6_61776659_61777726
Length = 1068
Score = 1253 bits (648), Expect = 0.0
Identities = 663/668 (99%)
Strand = Plus / Minus
Query: 1 ctttgcaagcctctcagatacaaagtgatttctgtagaagtaaatttttgtcatcctctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ctttgcaagcctctcagatacaaagtgatttctgtagaagtaaatttttgtcatcctctc 809
Query: 61 ttgaataagagtacaaaactgaaagtcatgataagggcatgcttccattttcttttattc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 ttgaataagagtacaaatctgaaagtcatgataagggcatgcttccattttcttttattc 749
Query: 121 tgtgcaaaataagcaaagctaagactactgagaaaaaagatgtttgctcatcaatacttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tgtgcaaaataagcaaagctaagactactgagaaaaaagatgtttgctcatcaatacttg 689
Query: 181 ggcattaggttgtggacacaaattaccaaatgtcaacactcttgaaacaaccgaagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 ggcattaggttgtggacacaaattaccaaatgtcaacactcttgaaacaaccgaagaata 629
Query: 241 tcttagagatgtaaaatttatttatacactttgtatgtacacatcctaagcaaaagttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tcttagagatgtaaaatttatttatacactttgtatgtacacatcctaagcaaaagttta 569
Query: 301 gtttaatattttcattagctgtgcttattaaagtgccagtactggcaatgatcccagtag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gtttaatattttcattagctgtgcttattaaagtgccagtactggcaatgatcccagtag 509
Query: 361 gagaatatgaagtgtataccagggtagttgagaggtgccatactggttttatttgtgatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gagaatatgaagtgtataccagggtagttgagaggtgccatactggttttatttgtgatg 449
Query: 421 ttgaacatatgtgtggaacataaaaaatgtgacatatggttttcttttttgcagaacagc 480
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 448 ttgaacatatgtgtggaacataaaaaatgtgacatatggttttcttgtgtgcagaacagc 389
Query: 481 agcacaccaaagcaacacatcagatctgtttagtgcacaagtattaaatactctactgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 agcacaccaaagcaacacatcagatctgtttagtgcacaagtattaaatactctactgtg 329
Query: 541 caaacatattgctttcgggagtaccgagggatactaaaagtggctctctttatctaagat 600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 328 caaacatattgctttcgggagtacccagggatactaaaagtggctctctttatctaagat 269
Query: 601 aaacaggctcattggcagaaaccttgctgattttaattaaaaggtaagcttgctaaagag 660
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aaacaggctcgttggcagaaaccttgctgattttaattaaaaggtaagcttgctaaagag 209
Query: 661 ttgtcaat 668
||||||||
Sbjct: 208 ttgtcaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
