Query= MSMg01no488_g21.b1 MSMg01no488_g21.b1 CHROMAT_FILE:
MSMg01no488_g21.b1 PHD_FILE: MSMg01no488_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:21 2005
(654 letters)
>mm_chr6_107175404_107176452
Length = 1049
Score = 1193 bits (617), Expect = 0.0
Identities = 642/653 (98%), Gaps = 5/653 (0%)
Strand = Plus / Minus
Query: 1 cttcattccatcatctgtgaaatgaggatatagacgacaggcagcatataacaggagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 cttcattccatcatctgtgaaatgaggatatagacgacaggcagcatataacaggagttt 694
Query: 61 gggatgccaggtcattgctcagcattttacagtcagagttgttccagccaaatcaggagc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 693 gggatgccaggtcattgctcagcattttacagtcagagttgttccagccaaaccaggagc 634
Query: 121 tcttgtcacaggaggtcattactgtctctgctgggtctgaagggcagaggggacatgggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tcttgtcacaggaggtcattactgtctctgctgggtctgaagggcagaggggacatgggt 574
Query: 181 taagggtcaggattttgcttatctatttaacaatacatcaagtctccaaactgtcagtgg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taagggtcaggactttgcttatctatttaacaatacatcaagtctccaaactgtcagtgg 514
Query: 241 gaagatttatgatttctgaggaacaaaggtggactctgagagacgtgagggcatcaggag 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 513 gaagatttatgatttctgaggaacaagggtggactctgagagacgtgagggcatcaggag 454
Query: 301 gaggtagggaaagcagtggctatttttcattgaatgctactctagagaaatgaattttat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 453 gaggtagggaaagcagtggctatttttcattgaatgctactctagagaaatgaattttct 394
Query: 361 tttcttctctcttcagaagccagttgccttccttccatgtccaaaatgagcacagttatt 420
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 393 tttctt-----ttcagaagccagttgccttccttccatgtccaaaatgagcacagttgtt 339
Query: 421 ttgctgcaggtttagtactgataggctagacgtagacagctcttaaatttattgtcttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ttgctgcaggtttagtactgataggctagacgtagacagctcttaaatttattgtcttta 279
Query: 481 tctacttttgatctgaatcaaatgctaaaactgctcagacctatcttttaccttttcctt 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 278 tctacttttgatctgaatcaaatgctaaaactgctcagacctatctgttaccttttcctt 219
Query: 541 cttagacacacaggtgcctttattttattttttattaaagatggaaatctttacttggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 cttagacacacaggtgcctttattttattttttattaaagatggaaatctttacttggag 159
Query: 601 taaatcaaattctgcattagccttataatcttggccttgaagcttttctcagg 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 taaatcaaattctgcattagccttataatcttggccttgaagcttttctcagg 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1049
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1039
Effective search space: 669116
Effective search space used: 669116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_g21.g1 MSMg01no488_g21.g1 CHROMAT_FILE:
MSMg01no488_g21.g1 PHD_FILE: MSMg01no488_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:21 2005
(662 letters)
>mm_chr6_107133863_107134924
Length = 1062
Score = 1257 bits (650), Expect = 0.0
Identities = 659/662 (99%)
Strand = Plus / Plus
Query: 1 agtgagtaaggaatgaacctttgtcttcctgcaatgctagtgagctccaaaattgcatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgagtaaggaatgaacctttgtcttcctgcaatgctagtgagctccaaaattgcatct 260
Query: 61 gttcctatgaattgtcttatagggggaaatgatcccagaacagttttaagtgaagcatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcctatgaattgtcttatagggggaaatgatcccagaacagttttaagtgaagcatgc 320
Query: 121 agagatgcaggtagtaaaagatttgttagtctctcacactgtaacatctcatcattttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagatgcaggtagtaaaagatttgttagtctctcacactgtaacatctcatcattttca 380
Query: 181 cttgaaaaagaatggggtcaatgaaggtacttaaaatcttgggatcttaagagagttaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgaaaaagaatggggtcaatgaaggtacttaaaatcttgggatcttaagagagttaaa 440
Query: 241 tttcttttatgcatgttacacgctaggaaagatgcctggctcttgcaatactttgtaggt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctttaatgcatgttacacgctaggaaagatgcctggctcttgcaatactttgtaggt 500
Query: 301 attatcttagaacatcagcatctctactttccattgctcgtattcactttatggatcctg 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attatcttagaacatcagcacctctactttccattgctcgtattcactttatggatcctg 560
Query: 361 gccagaaatatgtagaagctaacaaaagacagcagagatggctctgtttcagctgattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccagaaatatgtagaagctaacaaaagacagcagagatggctctgtttcagctgattct 620
Query: 421 aatattactagattggtagaacttctggaatactggttgaatagaggtttgatttctagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatattactagattggtagaacttctggaatactggttgaatagaggtttgatttctagg 680
Query: 481 ttcattagttttccccaacccatactagaaaacagaacaattaaactttcaaatgttggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttcattagttttccccaacccatactagaaaacagaacaattaaactttcaaatgttggc 740
Query: 541 ctcaattcacaaagatatccacgctgataaaaacatgtggtttgcaggattcgatttttt 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctcaattcacaaagatatccatgctgataaaaacatgtggtttgcaggattcgatttttt 800
Query: 601 tcgaagatgggtcatggcatatcctaataacaaaatccattttaaaaatcattgttatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcgaagatgggtcatggcatatcctaataacaaaatccattttaaaaatcattgttatgc 860
Query: 661 aa 662
||
Sbjct: 861 aa 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
