Query= MSMg01no489_i23.b1 MSMg01no489_i23.b1 CHROMAT_FILE:
MSMg01no489_i23.b1 PHD_FILE: MSMg01no489_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:50 2005
(370 letters)
>mm_chr6_35223793_35224562
Length = 770
Score = 638 bits (330), Expect = 0.0
Identities = 360/370 (97%)
Strand = Plus / Plus
Query: 1 gcactcgttctagcaggggacctaggtccagttcccaacacccacacggtagataacaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcactcgttctagcaggggacctaggtccagttcccaacacccacacggtagataacaac 260
Query: 61 catccctaactccaacttcaggggatctaatgccttctgaactctgcaggcaccaggtac 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 catccctaactccaacttcaggggatctaatgccttctgaattctgcaggcaccaggtac 320
Query: 121 acatatagacacacaggcaaaacatgaatacacatatattttaaaatttaaaatgcccca 180
|||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 acatgtatacacacaggcaaaacatgaatacacatacattttaaaatttaaaatgcccca 380
Query: 181 agtttggagtagtttagtgcatgtaaacaaaatggtaggagaagcatcctgaacctcagt 240
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
Sbjct: 381 agtttggagtagtttagtgcatgtaaacaaaatggcaggagaagcatcctgaacctcaat 440
Query: 241 ctgattcattcacaggactcttcacagacagatgacagcagaggccgctctgtcatttcc 300
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 441 ctgattcattcacaggactcttcacagacggatgatggcagaggccgctctgtcatttcc 500
Query: 301 cacaagtctcactgaaaagagtccatgctgagtgatcccatccagcgggtcaagccaccc 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 cacaagtctcactgaaaagagtccatgctgagcgatcccatccagcgggtcaagccaccc 560
Query: 361 tctatccact 370
||||||||||
Sbjct: 561 tctatccact 570
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_i23.g1 MSMg01no489_i23.g1 CHROMAT_FILE:
MSMg01no489_i23.g1 PHD_FILE: MSMg01no489_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:50 2005
(589 letters)
>mm_chr6_35416029_35417017
Length = 989
Score = 1042 bits (539), Expect = 0.0
Identities = 572/583 (98%), Gaps = 2/583 (0%)
Strand = Plus / Minus
Query: 1 tctaatcccagattgtcattagaaaacatagttttaaacttgaagttaaagcaatacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 582 tctaatcccagattgtcattagaaaacatagttttaaacttgaagttaaagcaatactgt 523
Query: 61 aattggttaaagtgaatcaagtccacctcccactgtgagcatgaataaatgtcataaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aattggttaaagtgaatcaagtccacctcccactgtgagcatgaataaatgtcataaaca 463
Query: 121 caatatagagttaaaaatagaaagcaaagtcatatactacagtttagaattttaaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 caatatagagttaaaaatagaaagcaaagtcatatactacagtttagaattttaaattta 403
Query: 181 ctaaaataccagtctagaatgttcacagatacacaggtataatttggtaaagaaatgtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctaaaataccagtctagaatgttcacagatacacaggtataatttggtaaagaaatgtgc 343
Query: 241 attaatctttttagaaccacattaaagacaggaatatctctaaagaaggggattaggaac 300
||||| || | ||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 342 attaaactgataagaaccacattgaagacaggaatatctctagagaaggggattaggaac 283
Query: 301 ggttatctacaatgagaatttcccgatgtgtctaatatattttgtttctttaaaaaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ggttatctacaatgagaatttcccgatgtgtctaatatattttgtttctttaaaaaaaga 223
Query: 361 aaagtacctaaaataacacacagggactggggaggtggctcagtgactgggaacacttgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aaagtacctaaaataacacacagggactggggaggtggctcagtgactgggaacacttgc 163
Query: 421 tgttcaagaagagagcctgaggtcaaa-cctacagcactcatacagaagccaagtatggt 479
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 162 tgttcaagaagagagcctgaggtcaaaccct-cagcactcatacagaagccaagtatggt 104
Query: 480 cacctttgtctgtacctgccagtgctgagggccaggtagagcccaggagttgagtggcca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 cacctttgtctgtacctgccagtgctgagggccaggtagagcccaggagttgagtggcca 44
Query: 540 cccagcgaagccaaagcatcaagctccgggttcagcgagagac 582
|||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 43 cccagcgaagccaaagcatcaagctctgggttcagcaagagac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
