Query= MSMg01no489_l24.b1 MSMg01no489_l24.b1 CHROMAT_FILE:
MSMg01no489_l24.b1 PHD_FILE: MSMg01no489_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:06 2005
(577 letters)
>mm_chr6_71540839_71541815
Length = 977
Score = 975 bits (504), Expect = 0.0
Identities = 533/550 (96%), Gaps = 12/550 (2%)
Strand = Plus / Minus
Query: 28 gcataagaatagcaatactataaattcccatacagtgcaaatccgtatcaattggatggg 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gcataagaatagcaatactataaattcccatacagtgcaaatccgtatcaattggatggg 918
Query: 88 ctgtcagtagttgctaagaaacaaggattctaaaaaaggggcggcctcgtcttctgtgtt 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 ctgtcagtagttgctaagaaacaaggattctaaaaaaggggcggcctcgtcttctgtgtt 858
Query: 148 tattttcagttttaatgcacttggagatttttgctgccttgagtttgcctgatcatcata 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tattttcagttttaatgcacttggagatttttgctgccttgagtttgcctgatcatcata 798
Query: 208 ttataccttttgttgttgttgttgttgttgttaatactgccttgtttataggagcatttc 267
||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 797 ttatacctt------------ttgttgttgttaatactgccttgaaaataggagcatttc 750
Query: 268 actagttcatgaatcagtccttggccccaaggtctcatgttctgaataaattgctaaagt 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 actagttcatgaatcagtccttggccccaaggtctcatgttctgaataaattgctaaagt 690
Query: 328 ctcaattggttttgttctcatttggcgagagactcaccttaagtgattgtcatttaaagg 387
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 689 ctcaattggttttgttctcatttggtgagagactcaccttaagtgattgtcatttaaagg 630
Query: 388 actagcaggagccgggagaactcagtttcactgtagttgcagaagttatgtggaagttcc 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 actagcaggagccgggagaactcagtttcactgtagttgcagaagttatgtggaagttcc 570
Query: 448 cagctctggaaagatagagctgtctctcctgaaacttgttcagtgttgaggctgctgatt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 cagctctggaaagatagagctgtctctcctgaaacttgttcagtgttgaggctgctgatt 510
Query: 508 acaaaccagggatttgtgactaatactctgaagtcatacctaagtcataggaacattcct 567
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 509 acaaaccagggatttgtgactaatactctgaagtcatacctgagtcataggaacattcct 450
Query: 568 agcccatttg 577
||||||||||
Sbjct: 449 agcccatttg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_l24.g1 MSMg01no489_l24.g1 CHROMAT_FILE:
MSMg01no489_l24.g1 PHD_FILE: MSMg01no489_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:06 2005
(552 letters)
>mm_chr6_71413538_71414489
Length = 952
Score = 644 bits (333), Expect = 0.0
Identities = 339/341 (99%)
Strand = Plus / Plus
Query: 1 tctgactaaaattgtagcttccagagtgggaacatatattcctaaaggcatacaaaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgactaaaattgtagcttccagagtgggaacatatattcctaaaggcatacaaaatat 260
Query: 61 ttattagacatataccaaaaataatttactaaaaatggcatgtgtatataaatgttctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattagacatataccaaaaataatttactaaaaatggcatgtgtatataaatgttctta 320
Query: 121 agataaagaagaaactggggctggtgagatggctcagtgggtaagagcacccgactgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agataaagaagaaactggggctggtgagatggctcagtgggtaagagcacccgactgctc 380
Query: 181 ttccccgaaggtccagagttcaaatcccagcaaccacatggtggctcacaaccacccgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccccgaaggtccagagttcaaatcccagcaaccacatggtggctcacaaccacccgaa 440
Query: 241 atgagatctgacgccctcgtctggtgtgtctgaggacagctacggtgtacttacatgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgagatctgacgccctcgtctggtgtgtctgaggacagctacggtgtacttacatgaaa 500
Query: 301 gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag 341
|||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 501 gaaagaaagaaagaaagaaagaaagaaagagagagagaaag 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
