Query= MSMg01no490_m23.b1 MSMg01no490_m23.b1 CHROMAT_FILE:
MSMg01no490_m23.b1 PHD_FILE: MSMg01no490_m23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:30 2005
(618 letters)
>mm_chr6_99760015_99761032
Length = 1018
Score = 1106 bits (572), Expect = 0.0
Identities = 599/610 (98%), Gaps = 4/610 (0%)
Strand = Plus / Plus
Query: 1 ctgcttgtgaccatggatgcaatgcagacccatgcctcaagctcctgttgccatgacgac 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ctgcttgtgaacatggatgcaatgcagacccatgcctcaagctcctgttgccatgacgac 264
Query: 61 acagtgtatctttgacctatgagctgaaatcaacccttccttctgtaagttgagtctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acagtgtatctttgacctatgagctgaaatcaacccttccttctgtaagttgagtc---- 320
Query: 121 aggcgttttgtcatagcaacaaggaatgatggttacagtgcacataaagactgtccccta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aggcgttttgtcatagcaacaaggaatgatggttacagtgcacataaagactgtccccaa 380
Query: 181 tgagttgggatacctcctgcttgcattgcaccttggcttccgggtgtacaaatcgattgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagttgggatacctcctgcttgcattgcaccttggcttccgggtgtacaaatcgattgg 440
Query: 241 cctatttattctggggctctgcctgcaggctcttttcagatcatggcttggtgagggcaa 300
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctagttaccctggggctctgcctgcaggctcttttcagatcatggcttggtgagggcaa 500
Query: 301 actgaagcagagaatgcctgtgtcgtgtaatgaatgaacctggagttaggtctggtaatg 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgaagcagagaatgcctatgtcgtgtaatgaatgaacctggagttaggtctggtaatg 560
Query: 361 tggctagttctgaaaagagtcctcagtcatacagagaaggaacttcaaaatgctgtaggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tggctagttctgaaaagagtcctcagtcatacagagaaggaacttcaaaatgctgtaggc 620
Query: 421 acttcagaaagaaaccttagagtctgtgcctgaataccaagtgacatatatacagggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttcagaaagaaaccttagagtctgtgcctgaataccaagtgacatatatacagggcca 680
Query: 481 agcatccaggatgtgagacaaggaaggaatggggagctgggagctgaactgagtctgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcatccaggatgtgagacaaggaaggaatggggagctgggagctgaactgagtctgtac 740
Query: 541 aggacaggaaggagttgttttaagaactcaaaagtattatagtgtcttaaatagagccta 600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 741 aggacaggaaggagttgttttaagaactcaaaagtattatagcgtcttaaatagagccta 800
Query: 601 cacacacaca 610
||||||||||
Sbjct: 801 cacacacaca 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_m23.g1 MSMg01no490_m23.g1 CHROMAT_FILE:
MSMg01no490_m23.g1 PHD_FILE: MSMg01no490_m23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:30 2005
(425 letters)
>mm_chr6_99934121_99934945
Length = 825
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%)
Strand = Plus / Minus
Query: 43 tacagaggaacccgctgcgctgctcttccgatgatcctcttccttcagtcgagcccactt 102
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 825 tacagaggaacccgctgcgctgctcttacgatgatcctcttccttcagtcgagcccactt 766
Query: 103 tggatttcttcccttctgtgattgatttgtttgtttgtcttgagacagcagctcccgcta 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 tggatttcttcccttctgtgattgatttgtttgtttgtcttgagacagcagctcccgcta 706
Query: 163 aagcccaggctggcctggaactcttaatcctcttgcctcggcctctcccgtgcagagtgc 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aagcccaggctggcctggaactcttaatcctcttgcctcggcctctcccgtgcagagtgc 646
Query: 223 agatgggcatcttgacgctcatcttcctttcatttgattgactgttttcctcttcatcat 282
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 645 agatgggcatcttgaagctcatcttcctttcatttgattgactgttttcctcctcatcgt 586
Query: 283 cttgctgcttaatgatctcagccccaggcttccaaggcaactggccaagaagattaagtt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 cttgctgcttaatgatctcagccccaggcttccaaggcaactggccaagaagattaagtt 526
Query: 343 ggtgtttgaagttgagcagctctcttctcgcatacctctcccctctcttctcctttcaca 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ggtgtttgaagttgagcagctctcttctcgcatacctctcccctctcttctcctttcaca 466
Query: 403 tcccacgacctcagaatcgtggc 425
|||||| ||||||||||||||||
Sbjct: 465 tcccacaacctcagaatcgtggc 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
