Query= MSMg01no491_l07.b1 MSMg01no491_l07.b1 CHROMAT_FILE:
MSMg01no491_l07.b1 PHD_FILE: MSMg01no491_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:42 2005
(413 letters)
>mm_chr6_38520633_38521445
Length = 813
Score = 770 bits (398), Expect = 0.0
Identities = 410/414 (99%), Gaps = 2/414 (0%)
Strand = Plus / Minus
Query: 1 agatttaggacacagtttcaactgtgtttcctattaaaaatgacaaagatgcttcctatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 agatttaggacacagtttcaactgtgtttcctattaaaaatgacaaagatgcttcctatt 554
Query: 61 ccatgtgtcttgatacttttatgcttaggagatatctttaatttcacttaaaaaat-aaa 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 553 ccatgtgtcttgatacttttatgcttaggagatatctttaatttcacttaaaaaataaaa 494
Query: 120 aaacactcatttgggcatctgtggtcggggtactcactgcttatgaaaagtaatctggaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaacactcatttgggcatctgtggtcggggtactcactgcttatgaaaagtaatctggaa 434
Query: 180 atcttttcttcattccagatatttctggcaaatgagaaataaaaccagggtcaagattta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 atcttttcttcattccagatatttctggcaaatgagaaataaaaccagggtcaagattta 374
Query: 240 tcccctaacaattttctcatcagcaagtgtatctgtgaagggaagttactcataatttca 299
||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tcccctaacaa-ttccccatcagcaagtgtatctgtgaagggaagttactcataatttca 315
Query: 300 atcaatcaaattataaagttaaaagatctatgccatttaaaaataaaggataggggacag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atcaatcaaattataaagttaaaagatctatgccatttaaaaataaaggataggggacag 255
Query: 360 tgaccctgtgagaacatgcccctggcaaaatatttctttcatccctctccagaa 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tgaccctgtgagaacatgcccctggcaaaatatttctttcatccctctccagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_l07.g1 MSMg01no491_l07.g1 CHROMAT_FILE:
MSMg01no491_l07.g1 PHD_FILE: MSMg01no491_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:42 2005
(332 letters)
>mm_chr6_38382986_38383716
Length = 731
Score = 588 bits (304), Expect = e-172
Identities = 325/332 (97%), Gaps = 1/332 (0%)
Strand = Plus / Plus
Query: 1 gttcgtttcccacgatgcttcaacgaagcctaagcaacgctccttcccactcaaagatga 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gttcgtttcccacgatgctccaacgaagcctaagcaacgctccttcccactcaaagatga 260
Query: 61 gccgtgaattttcttcccccgggagcatgtcccctaaaataacaccaaaggctgccaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgtgaattttcttcccccgggagcatgtcccctaaaataacaccaaaggctgccaaga 320
Query: 121 cgttcaagtcttcaagaactgttcctttgccagttcaatttcccaactgaggcgcgtcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgttcaagtcttcaagaactgttcctttgccagttcaatttcccaactgaggcgcgtcac 380
Query: 181 tgaacgtctcaccgccatgcgcaaagcggctaggaagaggtgtgggaggcagcggtgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgaacgtctcaccgccatgcgcaaagcggctaggaagaggtgtgggaggcagcggtgtgg 440
Query: 241 gaggcatctttatttctttcgggaggggtctgaggagagtttagttttcgcctttctacc 300
|||||| | | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaggcagcgt-agcgctttcgggaggggtctgaggagagtttagttttcgcctttctacc 499
Query: 301 ctggacacctcaggtgacgggacaacagaccg 332
||||||||||||||||||||||||||||||||
Sbjct: 500 ctggacacctcaggtgacgggacaacagaccg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 731
Length adjustment: 9
Effective length of query: 323
Effective length of database: 722
Effective search space: 233206
Effective search space used: 233206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
