Query= MSMg01no492_a09.b1 MSMg01no492_a09.b1 CHROMAT_FILE:
MSMg01no492_a09.b1 PHD_FILE: MSMg01no492_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:08 2005
(239 letters)
>mm_chr6_113829843_113830482
Length = 640
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 atgagcatcagggttggcaccaaatggccccaggacactgtcatctcttctcttggaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atgagcatcagggttggcaccaaatggccccaggacactgtcatctcttctcttggaaaa 381
Query: 61 ttctggaccatcccagaaaatgtcctccaagaactgttctgggctgtagtctctg-tgag 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 ttctggaccatcccagaaaatgtcctccaagaactgttctgggctgtagtctctgctgag 321
Query: 120 cctaagttctgcctgatgactcctgaggagcaggtttcctcagtgtcacggtctagtgca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cctaagttctgcctgatgactcctgaggagcaggtttcctcagtgtcacggtctagtgca 261
Query: 180 caatcctaaacaggaagtgacagtagacactacttgcagcctgcagaacccctgaaagga 239
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 caatcctagacaggaagtgacagtagacactacttgcagcctgcagaacccctgaaagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 640
Length adjustment: 9
Effective length of query: 230
Effective length of database: 631
Effective search space: 145130
Effective search space used: 145130
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no492_a09.g1 MSMg01no492_a09.g1 CHROMAT_FILE:
MSMg01no492_a09.g1 PHD_FILE: MSMg01no492_a09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:08 2005
(190 letters)
>mm_chr6_113695541_113696132
Length = 592
Score = 352 bits (182), Expect = e-102
Identities = 189/192 (98%), Gaps = 2/192 (1%)
Strand = Plus / Plus
Query: 1 tggtcataaattattgaccccctaatggggtgaactgccaaacgtatcccatgctgctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtcataaattattgaccccctaatggggtgaactgccaaacgtatcccatgctgctag 260
Query: 61 atataggacgcacaagtgcaagcttgtgtattacagtgagttctgacaaaccaaccatct 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atataggacgcagaagtgcaagcttgtgtattacagtgagttctgacaaaccaaccatct 320
Query: 121 cctgtgtaggtgtgtgtgt--atggaagagtgtgagagtgaggggctggggcataggcta 178
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtgtaggtgtgtgtgtgtatggaagagtgtgagagtgaggggctggggcataggcta 380
Query: 179 tctctcattcct 190
||||||||||||
Sbjct: 381 tctctcattcct 392
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 592
Length adjustment: 8
Effective length of query: 182
Effective length of database: 584
Effective search space: 106288
Effective search space used: 106288
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
