Query= MSMg01no497_g17.b1 MSMg01no497_g17.b1 CHROMAT_FILE:
MSMg01no497_g17.b1 PHD_FILE: MSMg01no497_g17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(689 letters)
>mm_chr6_61770591_61771679
Length = 1089
Score = 1292 bits (668), Expect = 0.0
Identities = 683/688 (99%), Gaps = 1/688 (0%)
Strand = Plus / Plus
Query: 1 ccctgaagtgataatgaaggcaaaatccagggttatttagtagagtcagctgatcaaaag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctgaagtgataatgaagacaaaatccagggttatttagtagagtcagctgatcaaaag 260
Query: 61 cacttttgatttcctcaaaagccatgaggtatcagctgtcaatgcagaggaaacaaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttttgatttcctcaaaagccatgaggtatcagctgtcaatgcagaggaaacaaacca 320
Query: 121 acttcctcaaaggtacagcttcagattgccctgtatttatttattttattaattaatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttcctcaaaggtacagcttcagattgccctgtatttatttattttattaattaatttt 380
Query: 181 cttatttattcatatcacaaatgttgcctcacacagccccctctcagaggctttccccca 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 cttatttattcatatcacaaatgttgcctcacacagccccctctcagaagctttccccca 440
Query: 241 tccctcttctccttctcctctgagagggtgcttccccagcaagccgcctccttggggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccctcttctccttctcctctgagagggtgcttccccagcaagccgcctccttggggtat 500
Query: 301 cacgtctctacaggattaggagcatcctctcccactgaagctagacaaagcagttctctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgtctctacaggattaggagcatcctctcccactgaagctagacaaagcagttctctt 560
Query: 361 ctgcatatgtaccaggaacctccgaacagcctgtataaactcatatgtgagctgggagtg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 ctgcatatgtaccaggaacctccgaacagcctgtataaactcatatgtgagccgggagtg 620
Query: 421 gtggtgcacgcctttaatcccagcactcgggaggcagaggcaggcagatttctgagttcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtggtgcacgcctttaatcccagcactcgggaggcagaggcaggcagatttctgagttcg 680
Query: 481 aggccagcctggtctacaaagtgggttccaggacatccagagctatacagagaaaccctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggccagcctggtctacaaagtgggttccaggacatccagagctatacagagaaaccctg 740
Query: 541 tctcaaaaaaacaaaaaaaccaacaaagaaaaaacactaaactcatatgtggcttagttc 600
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 tctcaaaaaaacaaaaaa-ccaacaaacaaaaaacactaaactcatatgtggcttagttc 799
Query: 601 tgggagctgactgggctccaagttagctgacactgttgatcttcctatggggttgccatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgggagctgactgggctccaagttagctgacactgttgatcttcctatggggttgccatc 859
Query: 661 cccttcagttcctttaatccttcacctg 688
||||||||||||||||||||||||||||
Sbjct: 860 cccttcagttcctttaatccttcacctg 887
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_g17.g1 MSMg01no497_g17.g1 CHROMAT_FILE:
MSMg01no497_g17.g1 PHD_FILE: MSMg01no497_g17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(324 letters)
>mm_chr6_61969091_61969814
Length = 724
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 1 aaataagtacatctatgtgctccaaacctgatttttatatccaggacaaaatgcatcttg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 524 aaataagtacatctatgtgctccaaacctgatttttaaatccaggacaaaatgcatcttg 465
Query: 61 gaaaactttgattctatctaagccaaatgaaaagaaggaacttactaatgtaaataattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 464 gaaaactttgattctatctaagccaaatgaaaagaaggaacttactaatgtaaataactt 405
Query: 121 gttgctatggactagattgcaccaacctggctttaaggttgtagagtattttcagaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 gttgctatggactagattgcaccaacctggctttaaggttgtagagtattttcagaccat 345
Query: 181 gttgtagctgaggactatcaacctggttttgttctccaaagccccttattatttagttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gttgtagctgaggactatcaacctggttttgttctccaaagccccttattatttagttct 285
Query: 241 ctagcagcctcccctgttgattgctctaacatctcttgttttcagtttgggagattttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ctagcagcctcccctgttgattgctctaacatctcttgttttcagtttgggagattttca 225
Query: 301 gagacttttagaaaaaggtaaaat 324
||||||||||||||||||||||||
Sbjct: 224 gagacttttagaaaaaggtaaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 724
Length adjustment: 9
Effective length of query: 315
Effective length of database: 715
Effective search space: 225225
Effective search space used: 225225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
