NNNNTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCTAGACTACAAAGTTCATCATAGAAATGACCACCTGCA
TACAACAGTCCAGACCAAGCAAACAATTAAAAAAAAAAGTCAGTGCAATG
TTGTATAATTAGTATGGGTGCATAGAATTGGAAGATGAGAGATTCACAGG
CAGCATGCGAAATAAGTGAGAGTGTATATCACAATCTGCTTAAAATTCTG
TTGCAAGAACCAGAAGAACAAAGGTGAGATGTGGACCATTCATTCACCAT
CCTTGTCTTGAGGTCTTCCAACTAGATTCTATGGGAAGCACCAGAACAAA
TGTCTTTCTGATCTCCCTATGCTAAGCCTTAGCAGGTACTTGATAAATAT
GCATGGACTGTCTAGTTGACATTTATGTATGGGTGAACACTGTCATTTAA
TGTCAAGAGAATATGGCCCAGTAGAGTGACAGCAAAGAGCTTTTGCCAAA
TTCTTCTATCCCCATGGAGAAAAGGGTTTCCTTATGTGAGACTGGATGGG
GGCTGGATGTGAAACCCATCTTACTAGTCTCTACTGCAAGCATATGGGGA
CCACAAAGTGAATCCCTTCATTCTTTCCCCAGATTTCTTAGTGTTGAATT
TGTTTGCTTCGTTTTTATTCTCTTGGCTAGATTCAGAGCCAAGTTGTTGT
AAGCTTAAGTTATCCAAACAAAATGTCAGAAGTCTGCGTATCAAAAAACT
CAAGTGGCATCCCTATAAACATTCATAGG

NCCACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTACCAGAAAATTGTACATGGAGTTAGAGGATTTGGAGT
TTGCCCTACTAGGTTTTGGTCCATGATCTCCTCACTGCCCTTTGGGAGTG
GTAATAAGTATTCTGTGCCAATGTATATTAGAAGTATGAAATTTGTGCTT
TGCTTTTACAGGAAGTTCCAATTAAGAGACCACCTTGAGTCTCAGTAGAG
ACTTTGAACTTTTAAACCATATTGAGACTTTGAAAGACCATGGCGACTTC
TGAAATTGAACTAAATGCATTTTGTTTGAAGATATGACTGAGACTTTGGG
AATCGGGAAGTAGAATGTGATGGTTTGAGAGAGCCATCCACCCCGAGTCT
TAAGCATTTGATGACTTGGTCCACAGTTGGTGGGTGGGTGGGATTAGGAG
GTGTNNNNTNNNNNNNNNNNNNNNNTTNTTNNNTTTTTTTNTTTTTTTTT
NNTTTGTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNTTTNTTTTTT
TTTNTTTNTTTTTTTTTTTTTNTTNNTGTNTTGTTTTTTTTTTTGTTTTT
GNTGNGTGTNTTTTTTTNTTTTTTTTTTTTGGGGGGGGTTNGGTGTTTTT
TTTTTTTTTTTTGNTTGGTTGGGGGGNTTGTTTTTGTTGTGTTTTTTTTT
TTGGTTTTTTTGGTTTGTGTTTTTTTTTTGTGGTTTTTTGTGTTTTTT

Query= MSMg01no498_o09.b1 MSMg01no498_o09.b1 CHROMAT_FILE:
MSMg01no498_o09.b1 PHD_FILE: MSMg01no498_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:07 2005
         (580 letters)



>mm_chr6_126327660_126328639
          Length = 980

 Score = 1083 bits (560), Expect = 0.0
 Identities = 572/576 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctctagactacaaagttcatcatagaaatgaccacctgcatacaacagtccagac 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 gaattctctagactataaagttcatcatagaaatgaccacctgcatacaacagtccagac 721

                                                                       
Query: 65  caagcaaacaattaaaaaaaaaagtcagtgcaatgttgtataattagtatgggtgcatag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 caagcaaacaattaaaaaaaaaagtcagtgcaatgttgtataattagtatgggtgcatag 661

                                                                       
Query: 125 aattggaagatgagagattcacaggcagcatgcgaaataagtgagagtgtatatcacaat 184
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 660 aattggaagatgagagattcacaggcagcatgcaaaataagtgagagtgtatatcacaat 601

                                                                       
Query: 185 ctgcttaaaattctgttgcaagaaccagaagaacaaaggtgagatgtggaccattcattc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctgcttaaaattctgttgcaagaaccagaagaacaaaggtgagatgtggaccattcattc 541

                                                                       
Query: 245 accatccttgtcttgaggtcttccaactagattctatgggaagcaccagaacaaatgtct 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 540 accatccttgtcttgaggtcttccaactagattctatgggaagcaccagaacgaatgtct 481

                                                                       
Query: 305 ttctgatctccctatgctaagccttagcaggtacttgataaatatgcatggactgtctag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ttctgatctccctatgctaagccttagcaggtacttgataaatatgcatggactgtctag 421

                                                                       
Query: 365 ttgacatttatgtatgggtgaacactgtcatttaatgtcaagagaatatggcccagtaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ttgacatttatgtatgggtgaacactgtcatttaatgtcaagagaatatggcccagtaga 361

                                                                       
Query: 425 gtgacagcaaagagcttttgccaaattcttctatccccatggagaaaagggtttccttat 484
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 360 gtgacagcaaagagcttttgccaaatttttctatccccatggagaaaagggtttccttat 301

                                                                       
Query: 485 gtgagactggatgggggctggatgtgaaacccatcttactagtctctactgcaagcatat 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gtgagactggatgggggctggatgtgaaacccatcttactagtctctactgcaagcatat 241

                                               
Query: 545 ggggaccacaaagtgaatcccttcattctttcccca 580
           ||||||||||||||||||||||||||||||||||||
Sbjct: 240 ggggaccacaaagtgaatcccttcattctttcccca 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space:   552900
Effective search space used:   552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)