Query= MSMg01no499_p03.b1 MSMg01no499_p03.b1 CHROMAT_FILE:
MSMg01no499_p03.b1 PHD_FILE: MSMg01no499_p03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:28 2005
(288 letters)
>mm_chr6_54156048_54156733
Length = 686
Score = 460 bits (238), Expect = e-134
Identities = 279/298 (93%), Gaps = 14/298 (4%)
Strand = Plus / Minus
Query: 1 catgaaagagaaaggacgaggggagcttagcaagcggttgaaatgaaagatctgtctggt 60
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 400 catgaaagagaaaggacga--ggagcttagcaagcggttgaaatgaaagatctgtctggt 343
Query: 61 gttaatttcttttgcacggtctattgtgaagatttagagaagcccctgcaacccttaccc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 342 gttaatttcttttgcacggtctattgtgaagatttagagaagcccctgcaacccctaccc 283
Query: 121 agtgacattttaattctgaggataaactcactgtgttcctattatgttctatatacacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agtgacattttaattctgaggataaactcactgtgttcctattatgttctatatacacat 223
Query: 181 ttgtgatttatattttaaaaaac----cagctctctctttctctgtctctatctatccct 236
||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||
Sbjct: 222 ttgtgatttatatttaaaaaaaaaaaacagctctctctttctctgtctctatctgtccct 163
Query: 237 ttctgtgtttgtttctgtctctgtc-c---ctc---c-ctccctccctccctccctcc 286
||||||||||||||||||||||||| | ||| | |||||||||||| |||||||
Sbjct: 162 ttctgtgtttgtttctgtctctgtctctgtctctgtctctccctccctccttccctcc 105
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 686
Length adjustment: 9
Effective length of query: 279
Effective length of database: 677
Effective search space: 188883
Effective search space used: 188883
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no499_p03.g1 MSMg01no499_p03.g1 CHROMAT_FILE:
MSMg01no499_p03.g1 PHD_FILE: MSMg01no499_p03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:28 2005
(161 letters)
>mm_chr6_53997788_53998348
Length = 561
Score = 281 bits (145), Expect = 2e-80
Identities = 157/161 (97%)
Strand = Plus / Plus
Query: 1 gaacatctgattgctcataagcacacttctcccccggccactaagtaggaccacacattg 60
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 201 gaacatctgattgctcataagcacactcctccaatggccactaagtaggaccacacattg 260
Query: 61 tggggagaaatccttttggatgacatagttctaagacaggggaccaaggaagaaagggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggagaaatccttttggatgacatagttctaagacaggggaccaaggaagaaagggaa 320
Query: 121 ccagccaaggacagagaactccatcttatgccatcattgca 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagccaaggacagagaactccatcttatgccatcattgca 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
