Query= MSMg01no502_a08.b1 MSMg01no502_a08.b1 CHROMAT_FILE:
MSMg01no502_a08.b1 PHD_FILE: MSMg01no502_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:57 2005
(589 letters)
>mm_chr6_108646957_108647945
Length = 989
Score = 1104 bits (571), Expect = 0.0
Identities = 583/587 (99%), Gaps = 2/587 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttacttatctagttattcagtt-ttgtatagcagccacatatcaaatgctgtg 62
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttactaatctagttattcagttattgtatagcagccacatatcaaatgctgtg 263
Query: 63 tatgcaatgggttctatagtagggctcctgtcctcttattactaaggggttatggtggtg 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatgcaatgggttctatagtagggctcctgtcctcttattactaaggggttatggtggtg 323
Query: 123 gtggtcatagacattgagaccaatctttaggacaagctggtcctctcctttgggctattg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtggtcatagacattgagaccaatctttaggacaagctggtcctctcctttgggctattg 383
Query: 183 acactcaagtcaccactatgaatcggacggctcaccagtgaattagccagatggatgaaa 242
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 acactcaagtcaccactatgaatcggacggctcaccggtgaattagccagatggatgaaa 443
Query: 243 ccacccaaacagggtgattggaactacaccttgtggtcacaggtggtttggagtgaatct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccacccaaacagggtgattggaactacaccttgtggtcacaggtggtttggagtgaatct 503
Query: 303 gagtggctttccaagtcattgctgtctcgattgcttcttatagcacacacctcaaagcta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gagtggctttccaagtcattgctgtctcgattgcttcttatagcacacacctcaaagcta 563
Query: 363 gcagagactggctgggtggggacctgagtcaccaccatcagccgagagcctttgtctgac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcagagactggctgggtggggacctgagtcaccaccatcagccgagagcctttgtctgac 623
Query: 423 gctttccatccacgtccaggaacacccttctggaaccaaggcgaaatgagaggtggagtc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gctttccatccacgtccaggaacacccttctggaaccaaggcgaaatgagaggtggagtc 683
Query: 483 cagcctgaaattagtgactagccatccgcaactctgtggttctctttccccagctcctcc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagcctgaaattagtgactagccatccgcaactctgtggttctctttccccagctcctcc 743
Query: 543 ctacctcttgtctcccacagatttgttggcactcacgggaagagccg 589
|||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 744 ctacctcttgtctcccacagatttgttggcactcacgg-aagagccg 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no502_a08.g1 MSMg01no502_a08.g1 CHROMAT_FILE:
MSMg01no502_a08.g1 PHD_FILE: MSMg01no502_a08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:57 2005
(593 letters)
>mm_chr6_108829412_108830404
Length = 993
Score = 644 bits (333), Expect = 0.0
Identities = 345/349 (98%)
Strand = Plus / Minus
Query: 4 ttacatagcttgtgcccgttgctggagctaaagtgatagatgctttgatttcacagatct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ttacatagcttgtgcccgttgctggagctaaagtgatagatgctttgatttcacagatct 290
Query: 64 tggtcctgttcctgctcccaaaacagtggataaggaagatggaactttggggactgaaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tggtcctgttcctgctcccaaaacagtggataaggaagatggaactttggggactgaaag 230
Query: 124 acacagggtgaaaaccaaggtgttcttgttgcaggatatttgatcacactgtgaaccatg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 acacagggtgaaaaccaaggtgttcttgttgcaggatatttgatcacactgtgaaccatg 170
Query: 184 agactgttatttactgggaaaccctgcttatagtagtggtgtggctcagccttagcactc 243
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 agactgttgtttactgggaaaccctgcttatagtagtggtgtggctcagccttagcactc 110
Query: 244 atctctaatccctctggctggacttcagacacggccttagtacacaccttaatcccgaac 303
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 109 atctctaatccctctggctggacttcagacacggacttagtacacaccttaatcccaaac 50
Query: 304 aggaagggtaaagctaggttgcagaaggaaacacccatgtttcaaagta 352
||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 aggaaaggtaaagctaggttgcagaaggaaacacccatgtttcaaagta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
