AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCACTCCTATTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATGGGC
AAGCAACGAATCAGGAGCTATCACGCCATATCAGGTGCTGAAATGTCACG
CTGCGGGTTATAAAAGCAGCGCCATTTTCCTGGTTTGGGATCTTCCTGAG
AAGCAAGCAATAAAGCTCTTGCCGCGGAAGATTCTGGTTTGTTGCATCTT
TCTTGCCGGTCGAGCGGGACACAATAACTGGGTGCTTCCAGGGCCCTATG
GTTTGAGTGAGGACTCCACGGGCTACCCCGTTTCTCTAGTCGATATACAA
GGTGAACGGCTTATTTACATCTGGCAGTGCTAGGGCAGGGGCTTGTAGCA
AGCCCTTTTTCAGAGTCTCAAAAGCCAACTGATGTTCTTGGGTCCAAATG
AATTCCCCTCTTTCCTTTGTTAGGGAGTACAGTGGGGCTGCCAGGGTGGC
AAACCCTGGGATCCATAGTCTACAGAATCCTGCTGTCCCCAGGAACTCTC
TTACCTGGGGTAGCCTCGTCCATGTGAGCTGTCCAGTCTTTTCACTTTCT
GGATCTCGCCATTCAAAGGCGAACAGGGGTTGACTATTGGGGTGTAACCT
CCGACAGAAGAAAGCATCTTTAAGATCTAGAACCGCGTACCACGTTTGCT
CANGTGGGAGTGTGCTGATCAGGTTATAAGGAATGGGCACTGTGGGGGTG
GATGTCCTGG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATCACCATACATTACATGGAGAGTG
ACAAGGCTTTTTATAAAGTTGTGCTATGCAGAGCTTTTATAATTAGAAAA
AGAAATTTGTACCAGCCATTCCTCCATCTTTCACAGGTTTAACTATCAAT
TTACAGTTAAGTAACAATGCTTTGGGGGCATTCTTTCTTTTTACACATCA
CTACCTGATCACCATAAAATCATCAAACAGAATTGTTCTTTTTGGATATT
TGTATGTAATGTATTCATCTCTCTTCACCTTAGACATTTCTCATGGGTTT
AAGTTACCAGTAATTTCTTCCTGAATTTAAGTAACAGACCTCAGATTGGA
CTCTCTCATCCTCTTTGTGATCTCCTTGGCCTCATGTTCTTCCTCTCCTG
CACATAAATATACATACCCAATCATTGGCCCATCATAAACAAACTGTGTT
TTAATTTTAAAACAATAATTTCTTGAGATACAGAATCAAAAAGCCAGAGG
AAGAGGAGGAGAGGTGTAAACTGTTATTTTCTGGATATTACTTGGCAATT
ACCTCATTTAATTCACAGCAGCCTTGCTTATAGCCATGAATATACAATAC
ACAGACCCCAAGAAGACAAATAAAAAGGAAAGTCTAGGAAGGAATGTTGA
CTATTTTTCTCATAAATGGAAATTAAATGGATATCAGAGGTTCATATAGG
GGAGAGAACGGGATGGTAGAGGGAA

Query= MSMg01no509_d19.g1 MSMg01no509_d19.g1 CHROMAT_FILE:
MSMg01no509_d19.g1 PHD_FILE: MSMg01no509_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:25 2005
         (656 letters)



>mm_chr6_44028966_44030021
          Length = 1056

 Score = 1245 bits (644), Expect = 0.0
 Identities = 653/656 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   catcaccatacattacatggagagtgacaaggctttttataaagttgtgctatgcagagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 catcaccatacattacatggagagtgacaaggctttttataaagttgtgctatgcagagc 598

                                                                       
Query: 61  ttttataattagaaaaagaaatttgtaccagccattcctccatctttcacaggtttaact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ttttataattagaaaaagaaatttgtaccagccattcctccatctttcacaggtttaact 538

                                                                       
Query: 121 atcaatttacagttaagtaacaatgctttgggggcattctttctttttacacatcactac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atcaatttacagttaagtaacaatgctttgggggcattctttctttttacacatcactac 478

                                                                       
Query: 181 ctgatcaccataaaatcatcaaacagaattgttctttttggatatttgtatgtaatgtat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctgatcaccataaaatcatcaaacagaattgttctttttggatatttgtatgtaatgtat 418

                                                                       
Query: 241 tcatctctcttcaccttagacatttctcatgggtttaagttaccagtaatttcttcctga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tcatctctcttcaccttagacatttctcatgggtttaagttaccagtaatttcttcctga 358

                                                                       
Query: 301 atttaagtaacagacctcagattggactctctcatcctctttgtgatctccttggcctca 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 357 atttaagtaacagacctcagattggactctctcatcctctttgtggtctccttggcctca 298

                                                                       
Query: 361 tgttcttcctctcctgcacataaatatacatacccaatcattggcccatcataaacaaac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgttcttcctctcctgcacataaatatacatacccaatcattggcccatcataaacaaac 238

                                                                       
Query: 421 tgtgttttaattttaaaacaataatttcttgagatacagaatcaaaaagccagaggaaga 480
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 237 tgtgttttaattttaaaacaataatttcttgagatacagaatcaaagagccagaggaaga 178

                                                                       
Query: 481 ggaggagaggtgtaaactgttattttctggatattacttggcaattacctcatttaattc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ggaggagaggtgtaaactgttattttctggatattacttggcaattacctcatttaattc 118

                                                                       
Query: 541 acagcagccttgcttatagccatgaatatacaatacacagaccccaagaagacaaataaa 600
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 117 acagcagccttgcttatagccatgaatatacaatacacagacccaaagaagacaaataaa 58

                                                                   
Query: 601 aaggaaagtctaggaaggaatgttgactatttttctcataaatggaaattaaatgg 656
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57  aaggaaagtctaggaaggaatgttgactatttttctcataaatggaaattaaatgg 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space:   675716
Effective search space used:   675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)