NNAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTGCCTTACCTTTATTCCCACTGAGGATTTGAGATAATAACA
TAATAAAGTAATTTAATAGAACACTCAAAGTAAATAGAATATCAAACAAT
GAAAAATTATATGTCACTCATTGACTTGGAGTATTTTAAATTCCTTAATA
GTGATACACTCTTTTTTCTTTCAAGGCACTAACAGAATAGAAATACCCTA
ACCTACAAACATCCTGCTTGACTACTAGGTGGATTTAGCAGGTGAAATCT
ATTCCTTCTCCTCCAAGAGAAATTGGTCAAATCCCAAATCTAGGAAGTTG
AAATCTCGTCTTTTTCCTGTGTTGATTGTTGTAATAGATATTTTAGTCGA
ATCAAAATGTTTTCACTGTGAAGAGATACCTCAATAGTTATGGTCACGTT
GCTTTTGCAAAGGATTGTGGTTTGTGTCCCAGCATCCACAGAATGGCTTA
AAATTGTCTGTCACGCCAGTTTCAGGAGCCCCACACTCTCCTCTGTCTCT
TTTGGACACCAAACATATACATGGTCCATATATACATATCTAGTAAAAAC
TCTCACACATATAAAATAAAATATGTACATTTTGATAAAATTGTAGAACC
AAAGTATTTTCATGAAAGATTAATAGGCATAAGTAAAATTAGTAGTTTTG
TGTACTGTGTAAATCAAAGTCAAAACTTTCTAA

NAACACGATGAAGTGGGAGGCCTGGNGGNCGCCTGTTTCAAACATGGAGG
TGAACTATAGAAGTATCAGAAAAATTCGATAGAGGAGAAAGTGAGAAAGA
GCCTAGAACAGAGCAGAACAGGTGAAAATTTCCTGAAAAGAACACCAAAT
GCTCAGGCTGTAAGATCAACCATAGACAATTGAGATCTCATATAATTGAA
AAGCTTCTGCAAGGCAAAGGGCACTGTCAATAGGACCAAACAGAAAACTA
CTGGATGGGAAAAAATCTTTACCAACCCTACATCTGATAGAGGGCTAATT
AAAAGAACTCAAGAAGTTTATTCTCTGAGAACCCCATTAAAATGAGGTAC
AGAGCATAACAATGAATTGCCAACTGAGGAATCTCTAATGACTGAGAGGC
ACCTAAAGAAATGTTCAACATCCTTAGTTATCAGGAAAATGAAAGTCAAA
ACAACCAGAGACTCTACCTCATACCAGTCAGAATGACTAAGGTAAAAAAC
TCAGGTGATGGCAAGAATGTAAGAAAGAGGAACACTCCTCCATTGCTGGT
GGGATTGCAAGCTGGTACAAACACTCTGGAAATAAGTCTGGCAGTTCCTC
AGAAAACTGAACATAGCACTACCTAAGAACCCAGCTATATTAATCCTAGG
CATATACCCAAAATATTCTCCAACATATATCAAGGACACATACACGCTCC
ACTATGTTCATAGCTTCTTCCCAGATCCTAAG

Query= MSMg01no510_d10.b1 MSMg01no510_d10.b1 CHROMAT_FILE:
MSMg01no510_d10.b1 PHD_FILE: MSMg01no510_d10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:44 2005
         (685 letters)



>mm_chr6_74344976_74346060
          Length = 1085

 Score = 1278 bits (661), Expect = 0.0
 Identities = 676/681 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttgccttacctttattcccactgaggatttgagataataacataataaagtaat 64
           |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattcttgcctaacatttattcccactgaggatttgagataataacataataaagtaat 826

                                                                       
Query: 65  ttaatagaacactcaaagtaaatagaatatcaaacaatgaaaaattatatgtcactcatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 ttaatagaacactcaaagtaaatagaatatcaaacaatgaaaaattatatgtcactcatt 766

                                                                       
Query: 125 gacttggagtattttaaattccttaatagtgatacactcttttttctttcaaggcactaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 gacttggagtattttaaattccttaatagtgatacactcttttttctttcaaggcactaa 706

                                                                       
Query: 185 cagaatagaaataccctaacctacaaacatcctgcttgactactaggtggatttagcagg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cagaatagaaataccctaacctacaaacatcctgcttgactactaggtggatttagcagg 646

                                                                       
Query: 245 tgaaatctattccttctcctccaagagaaattggtcaaatcccaaatctaggaagttgaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgaaatctattccttctcctccaagagaaattggtcaaatcccaaatctaggaagttgaa 586

                                                                       
Query: 305 atctcgtctttttcctgtgttgattgttgtaatagatattttagtcgaatcaaaatgttt 364
           |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 585 atctcgtctttttcctgtgttggttgttgtaatagatattttagtcgaatcaaagtgttt 526

                                                                       
Query: 365 tcactgtgaagagatacctcaatagttatggtcacgttgcttttgcaaaggattgtggtt 424
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 525 tcactgtgaagagatacctcaatagttatggtcacgttgtttttgcaaaggattgtggtt 466

                                                                       
Query: 425 tgtgtcccagcatccacagaatggcttaaaattgtctgtcacgccagtttcaggagcccc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tgtgtcccagcatccacagaatggcttaaaattgtctgtcacgccagtttcaggagcccc 406

                                                                       
Query: 485 acactctcctctgtctcttttggacaccaaacatatacatggtccatatatacatatcta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acactctcctctgtctcttttggacaccaaacatatacatggtccatatatacatatcta 346

                                                                       
Query: 545 gtaaaaactctcacacatataaaataaaatatgtacattttgataaaattgtagaaccaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gtaaaaactctcacacatataaaataaaatatgtacattttgataaaattgtagaaccaa 286

                                                                       
Query: 605 agtattttcatgaaagattaataggcataagtaaaattagtagttttgtgtactgtgtaa 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 agtattttcatgaaagattaataggcataagtaaaattagtagttttgtgtactgtgtaa 226

                                
Query: 665 atcaaagtcaaaactttctaa 685
           |||||||||||||||||||||
Sbjct: 225 atcaaagtcaaaactttctaa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1085
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1075
Effective search space:   725625
Effective search space used:   725625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)