Query= MSMg01no511_o23.b1 MSMg01no511_o23.b1 CHROMAT_FILE:
MSMg01no511_o23.b1 PHD_FILE: MSMg01no511_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:55 2005
(592 letters)
>mm_chr6_113724894_113725885
Length = 992
Score = 1116 bits (577), Expect = 0.0
Identities = 586/589 (99%)
Strand = Plus / Minus
Query: 4 ggaattcatgccatgccttgctaaagaagcaagtccacatgtagacatgcaggtctgagt 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggaattcatgccatgccttactaaagaagcaagtccacatgtagacatgcaggtctgagt 682
Query: 64 gaggttgctttgattgtatctgtgtccctgccttgttgtgatactgttgctatggtgatg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gaggttgctttgattgtatctgtgtccctgccttgttgtgatactgttgctatggtgatg 622
Query: 124 tgagaggctaacactgggagaagctgtgaggagagtaccagagggcctcctatgttagtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgagaggctaacactgggagaagctgtgaggagagtaccagagggcctcctatgttagtt 562
Query: 184 ttcatcaacagttaccttaaaataaaatgccacaatacacacccagtgatgattaaaaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcatcaacagttaccttaaaataaaatgccacaatacacacccagtgatgattaaaaac 502
Query: 244 aaatcaaagatcgagaccagttctgggtcaaatggtaaattctgcagatgaaaaatacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatcaaagatcgagaccagttctgggtcaaatggtaaattctgcagatgaaaaatacag 442
Query: 304 agaggggttcaacttttaaaaacagaaagggaaaaaatctggctagacattttggcacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaggggttcaacttttaaaaacagaaagggaaaaaatctggctagacattttggcacat 382
Query: 364 gcttgtaatctcagcaattgggagctaggggcaagaggatcaagacttttaagaacatgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttgtaatctcagcaattgggagctaggggcaagaggatcaagacttttaagaacatgt 322
Query: 424 ttggctgtgtgccaagttcaaattcagcctgagctacatgagacagacccaatcataaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggctgtgtgccaagttcaaattcagcctgagctacatgagacagacccaatcataaaa 262
Query: 484 tatgcgaagaatttgaagcatttatgatgctgtctgactatttcttttatcattgtcttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatgcgaagaatttgaagcatttatgatgctgtctgactatttcttttatcattgtcttt 202
Query: 544 ttttatgctgcataatgtgctgtgtttggtttgtgttaatatgacacaa 592
|||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatgccgtataatgtgctgtgtttggtttgtgttaatatgacacaa 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no511_o23.g1 MSMg01no511_o23.g1 CHROMAT_FILE:
MSMg01no511_o23.g1 PHD_FILE: MSMg01no511_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:41:56 2005
(106 letters)
>mm_chr6_113695492_113695999
Length = 508
Score = 194 bits (100), Expect = 2e-54
Identities = 106/108 (98%), Gaps = 2/108 (1%)
Strand = Plus / Plus
Query: 1 tttatttaca-ttattgtctagataaaaaa-ttcataaaaacagatgaatggtcataaat 58
|||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tttatttacaattattgtctagataaaaaaattcataaaaacagatgaatggtcataaat 260
Query: 59 tattgaccccctaatggggtgaactgccaaacgtatcccatgctgcta 106
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattgaccccctaatggggtgaactgccaaacgtatcccatgctgcta 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 508
Length adjustment: 8
Effective length of query: 98
Effective length of database: 500
Effective search space: 49000
Effective search space used: 49000
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
