TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGAA
CATATGTAAAACAAAATTCACCATGATTAATTAGGCTTCATCCCAATGAT
GTAAGAAGTTTCAATATAGAAAAATCTATCAATGTAATCCACCATATAAA
CAACATGAAAGAAAAATCACGTGATCATCTCATTAGACACTGAAGAAAGC
CATAGATAAAATCCAACACCTCTTCATGTTACTAGTTATGGAAGGATCAC
TGGTGCAAGGTCCATACTTTAACATAATAAAAATAATATACAGCAAGCCA
ATAGCCAAGAGCAAATTAAGTTGCAAGAATCCTAAAGCAATTCCACTAAA
ATAGGGGACAAGATAAGGCTGACCACTCTCATCTTATCTATTCAATACAG
TACTTGAAGTTCTTCATAGAACAATAAGACAAAAAAAGGACATCAAGGGG
ATACAAGTTGGCAAAGAAGAATATGGTATAATATACAGGAGCAGTTCCCA
AAAATTCTACCAGAGAACTCCTACAACTGACAAACACCTTCATCAAATTG
ACTGGAGAAAATTAATTAAAATATTCAGTATCCCTCATTTATTCAGATGT
TGACTGAGCCTAGATAGAAATTACAGAAACAACACCCTTCACAACAGCCA
CAAATAATATAAAACATCTAAGTGTAACTCTAACCAAACAATTGAAAGAC
CTGTGTGACAAGATATTCAATCCCCGAATAAATAAATCAAAGAAGAAACC
AGAAGATGGA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCACAGGAAGACCCACAGTGTCAACTAACATGGAC
ACATGGGGCCTCTCAGAGACTGAATCACCAAAGAGAATGCAAGAGCTGAA
GTGAGCCCACACTTCTCGAGGGCACATATGTAGCAGAAACACAGCTTGGT
CTTCATGTGGGGCCTCCAAGAACTGTTGCCTGCCCATGGATCCTGTTTTC
TCTGCCTTGCCTTGTCTGGCCTCAGTGGGAGAGGAAGTGCCTAGTCCTAT
ATTAACTTTACATACCAGGATAGGTTGGTACATGTGTGGGAGAGGGCATC
CCCTTCACCGAGAAGGAGAGAGCAGAGGTGTGTTATATAAAATGGTGACT
AAGCAGAGAATGAAAGACTGCGATCAGGATGTGAATAAAAAAAAAAAAAA
AAAAAGAAAGACATAACAAAATACATTCACTTTACACTCTTCCTTTCCTT
GTTCCTTGATATCATAAATCACTCTAAAATGAATTCTTTATTGTGGTTAA
TTTACATGAACTTGCTTAGAGCTAAAAATTAAATGAATAAATAACAATGT
TTACTGAATGAAATGGATTTTTCTATCTAGAACAATTACATTCTTTTCAC
ACACTATTTTCAAATGAAGAATATAATTGTAGGAAACAAATTATTATTTG
CCAAATTACACAGGTAGATATTTACATAGTTTTATATAAGAGTATTTATG
TCCTTCATACACAC

Query= MSMg01no513_a14.g1 MSMg01no513_a14.g1 CHROMAT_FILE:
MSMg01no513_a14.g1 PHD_FILE: MSMg01no513_a14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:24 2005
         (646 letters)



>mm_chr6_75253922_75254968
          Length = 1047

 Score =  886 bits (458), Expect = 0.0
 Identities = 464/466 (99%), Gaps = 1/466 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  ttctctgccttgccttgtctggcctcagtgggagaggaagtgcctagtcctatattaact 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ttctctgccttgccttgtctggcctcagtgggagaggaagtgcctagtcctatattaact 988

                                                                        
Query: 242  ttacataccaggataggttggtacatgtgtgggagagggcatccccttcaccgagaagga 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  ttacataccaggataggttggtacatgtgtgggagagggcatccccttcaccgagaagga 928

                                                                        
Query: 302  gagagcagaggtgtgttatataaaatggtgactaagcagagaatgaaagactgcgatcag 361
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 927  gagagcagaggtgtgttatataaaatggtgactaagcagagaatggaagactgcgatcag 868

                                                                        
Query: 362  gatgtgaataaaaaaaaaaaaaaaa-aaagaaagacataacaaaatacattcactttaca 420
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 867  gatgtgaataaaaaaaaaaaaaaaagaaagaaagacataacaaaatacattcactttaca 808

                                                                        
Query: 421  ctcttcctttccttgttccttgatatcataaatcactctaaaatgaattctttattgtgg 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ctcttcctttccttgttccttgatatcataaatcactctaaaatgaattctttattgtgg 748

                                                                        
Query: 481  ttaatttacatgaacttgcttagagctaaaaattaaatgaataaataacaatgtttactg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747  ttaatttacatgaacttgcttagagctaaaaattaaatgaataaataacaatgtttactg 688

                                                                        
Query: 541  aatgaaatggatttttctatctagaacaattacattcttttcacacactattttcaaatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687  aatgaaatggatttttctatctagaacaattacattcttttcacacactattttcaaatg 628

                                                          
Query: 601  aagaatataattgtaggaaacaaattattatttgccaaattacaca 646
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627  aagaatataattgtaggaaacaaattattatttgccaaattacaca 582


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space:   659532
Effective search space used:   659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)