XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTGT
TTATCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGTCC
ACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTGTCTGATTT
AGGATAGGCAAAGATCCTTTCCAAATCTGTTGGTGGCCTTTTTGTCTTAT
TGATGGTGTCTGTTGCCTTACAGAAGCTTTGCAATTTTATGAGGTCTCAT
TTGTCGATTCTCGATCTTACAGCACAAGGCATTGCTGTTCTATTCAGGAC
TTTTTCCCCTGTGCCCATATCTTCGAGGCTTTTCCCCACTTTCTCCTCTA
TAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTTAGAT
TTGACCTTAGTACAAGGAGATAGGAATGGATCAATTTGCATTCTTCTATA
CGATAACTGCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTTT
TCCACTGGATGGTTTTAGCTCCCTTGTCAAAGATCAAGTGACCATAGGTG
TGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTTTACTTGTCT
GTCGCTATACCAGTACCCATGGAAGGAGTTACAGAGACAAAGTTTGGAGC
TGAGATGAAAGGATGGACCATCAAGAGACTGCCATACCCAGGGATCCATC
CCATAATCAGCCTCCAAACGCTGACACCATTGCATATACCAGCAAGATTT
TGCTGAACGGACC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCCTAACTGAGCTGACTGGATGAAAACTGCTTTTGT
AAGGTGATACAAATGCTATGTGTGTAAAATAAACCTAGAAAGAAAAGTCC
ATTTACAGATATATTATGGAGATATTTTATTCCCAGATTTTTTTTTAAAG
CATCTCCTAAGCTGCCATTTTAGCAGATTTTCGAGACTTGCATCTCATCA
TGCTAATAGCAACAGGAGTTACCTTTTATTTATGAATGGCCAAGAAAGAT
GATCTTGGTACAGGTTTGGATTTCCTTAGCACTTACTTTGGGCATCCTGC
AGTTAGACAGCATTATCAACTGCTCATGTCGGTTTTCATTTTTCATACTA
CTGTACTGGTGACTTGCTTGAATCCACATTGCTGCCTGTTGTTGTTGTGT
TTTTTTTTTTTTTTTTTAGAATAGAATAGAGTTTATTCAGGGCATAGGGA
GGGGATTTAAGAGGGTAGTAGAGGCAGAGAAAGGCNGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNAGNNNNNNNGGGGGNNGGGGGAGGANGGGGNGNGGGGGGGAGG
AGGAGGGGGGAAGAAAAGTAGAATGAGGGAAGAGATGAGGAAGAGAGAAN
GNGANGGATGTTTTTTAAATAGTGGTGTGATATATTTTATTGTGTGATAT
TTGTTGTATTGTGAGTGTTAGNGTATGTTTGTTTTTATGA

Query= MSMg01no513_d23.g1 MSMg01no513_d23.g1 CHROMAT_FILE:
MSMg01no513_d23.g1 PHD_FILE: MSMg01no513_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:40 2005
         (505 letters)



>mm_chr6_17767107_17768013
          Length = 907

 Score =  862 bits (446), Expect = 0.0
 Identities = 493/515 (95%), Gaps = 18/515 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctaactgagctgactggatgaaaactgcttttgtaaggtgatacaaatgctatgtgtgt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 cctaactgagctgactggatgaaaactgcttttgtaaggtgatacaaatgctatgtgtat 260

                                                                       
Query: 61  aaaataaacctagaaagaaaagtccatttacagatatattatggagatattttattccca 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaataaacctagaaagaaaagaccatttacagatatattatggagatattttattccca 320

                                                                       
Query: 121 gatttttttttaaagcatctcctaagctgccattttagcagattttcgagacttgcatct 180
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatttttttt-aaagcatctcctaagctgccattttagcagattttcgagacttgcatct 379

                                                                       
Query: 181 catcatgctaatagcaacaggagttaccttttatttatgaatggccaagaaagatgatct 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catcatgctaatggcaacaggagttaccttttatttatgaatggccaagaaagatgatct 439

                                                                       
Query: 241 tggtacaggtttggatttccttagcacttactttgggcatcctgcagttagacagcatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tggtacaggtttggatttccttagcacttactttgggcatcctgcagttagacagcatta 499

                                                                       
Query: 301 tcaactgctcatgtcggttttcatttttcatactactgtactggtgacttgcttgaatcc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaactgctcatgtcggttttcatttttcatactactgtactggtgacttgcttgaatcc 559

                                                                       
Query: 361 acattgctgcctgttgttgttgt------gtttttttttttttttttt----agaataga 410
           |||||||||||||||||||||||      |||||||||||||||||||    ||||||||
Sbjct: 560 acattgctgcctgttgttgttgttgttgtgttttttttttttttttttttttagaataga 619

                                                                       
Query: 411 atagagtttattcagggcatagggaggggatttaagagggtagtagaggcagagaaaggc 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atagagtttattcagggcatagggaggggatttaagagggtagtagaggcagagaaaggc 679

                                              
Query: 471 n--gagagagagagagagagagagagagag-agag 502
              ||||| ||||| ||||| ||||| ||| ||||
Sbjct: 680 aaggagag-gagag-gagag-gagag-gagtagag 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 907
Length adjustment: 10
Effective length of query: 495
Effective length of database: 897
Effective search space:   444015
Effective search space used:   444015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)