XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTA
CCTGAGGAATACCGAATGGCATAGAAGCACCTGAAAAAATGTTCAACATC
CTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCTCA
CACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGG
CATGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAG
GCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGG
ACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCA
GAAGATGCCCCAACTGGTAAGAAGGACCCATGCTCCACTATGTTCATAGC
AGCCTTATTTATAATAGCCAGACGCTGGAAAGAACCCAGATGCCCCTCAA
CAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTACTAC
TCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAGTAGATGGA
CCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCAC
ACAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGATACC
CAAGATATAAGATACAATTTGCTAAACACATGAAACTCAAGAAGAATGAA
GACTGAAGTGTGGACACTATGCCCCTCCCTTGAAATGGGAAACAAACACC
CATGGAAGGAGGTACA

AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXATAGCATGTCAAAGAAACAGGGTTAGAAGCAG
CTGTTTGCTAAAGCAAGTATTTTACAAATATAGTGGGCTGCCTTATAGTA
CAAAGGCCAAACTAGAGTTATGCAGAGTGTGGTTCTATGAGAAAACATGC
TTTGTTGCACAAAGCCAAGGAGCTGAGTTCAAATCCTTAGAAGCTGTGAG
AATTGGAGACAGGGAAGCATTCATGTAATCTTCAAGTTCCTAAACAAAAT
TTAAAGGAGAAATAGGGATTCCTGTGACTCAGATACCACCCATCAAAAGA
TCGTGCTGGCAACTTATGACCACATAGAGGTATCTGAGTTGCTTTTGACT
ATACGTGAATAATCCTGGAAGTGCATGTAACTGTGTCTGAGAAACTTAAC
AGAGTGGCTTGTCATAGTGTACTGAGACTGAGCCAAAGCAGACATGCAGT
CAGATCTCAAGAGATTGACCCAATACCATGGGAAGTGAGGTAGTATTAAG
TCAGCAAAAGACTAGTGATGCTAAGAAAACTAGTATGGGGGCCGGGCGTG
GTGGCACACGCCTTTAATCCCAGCACTCATAANGCAGAGGCAGGCGGATT
TCTGAGTTCCANGACAGCCTGGNTCTACAAGTGAGTTCCAGGACAGCCCA
GGCTACACAGAGAAACCCTGTCTCGTAAAACCCCNNAAAAANAAAAAAAA
GGAAGGAGAGAGAAGAAACT

Query= MSMg01no513_n23.g1 MSMg01no513_n23.g1 CHROMAT_FILE:
MSMg01no513_n23.g1 PHD_FILE: MSMg01no513_n23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:32 2005
         (544 letters)



>mm_chr6_44021780_44022723
          Length = 944

 Score = 1006 bits (520), Expect = 0.0
 Identities = 538/544 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atagcatgtcaaagaaacagggttagaagcagctgtttgctaaagcaagtattttacaaa 60
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atagcatgtcagagaaacagggttagaagcagctgtttgctaaagcaagtattttacaaa 685

                                                                       
Query: 61  tatagtgggctgccttatagtacaaaggccaaactagagttatgcagagtgtggttctat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatagtgggctgccttatagtacaaaggccaaactagagttatgcagagtgtggttctat 625

                                                                       
Query: 121 gagaaaacatgctttgttgcacaaagccaaggagctgagttcaaatccttagaagctgtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gagaaaacatgctttgttgcacaaagccaaggagctgagttcaaatccttagaagctgtg 565

                                                                       
Query: 181 agaattggagacagggaagcattcatgtaatcttcaagttcctaaacaaaatttaaagga 240
           |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agaactggagacagagtagcattcatgtaatcttcaagttcctaaacaaaatttaaagga 505

                                                                       
Query: 241 gaaatagggattcctgtgactcagataccacccatcaaaagatcgtgctggcaacttatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaatagggattcctgtgactcagataccacccatcaaaagatcgtgctggcaacttatg 445

                                                                       
Query: 301 accacatagaggtatctgagttgcttttgactatacgtgaataatcctggaagtgcatgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accacatagaggtatctgagttgcttttgactatacgtgaataatcctggaagtgcatgt 385

                                                                       
Query: 361 aactgtgtctgagaaacttaacagagtggcttgtcatagtgtactgagactgagccaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 384 aactgtgtctgagaaacttaacagagtggcttgtcatagtgtactgagactgaaccaaag 325

                                                                       
Query: 421 cagacatgcagtcagatctcaagagattgacccaataccatgggaagtgaggtagtatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagacatgcagtcagatctcaagagattgacccaataccatgggaagtgaggtagtatta 265

                                                                       
Query: 481 agtcagcaaaagactagtgatgctaagaaaactagtatgggggccgggcgtggtggcaca 540
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 264 agtcagcaaaagactagtgatgctaaaaaaactagtatgggggccgggcgtggtggcaca 205

               
Query: 541 cgcc 544
           ||||
Sbjct: 204 cgcc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)