Query= MSMg01no515_c10.b1 MSMg01no515_c10.b1 CHROMAT_FILE:
MSMg01no515_c10.b1 PHD_FILE: MSMg01no515_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:20 2005
(492 letters)
>mm_chr6_31596721_31597612
Length = 892
Score = 762 bits (394), Expect = 0.0
Identities = 424/436 (97%), Gaps = 4/436 (0%)
Strand = Plus / Minus
Query: 61 acctgcaacctagcctaatattcataatttaacagcttctacaaataaattagatgatta 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 892 acctgcaacctagcctaatattcagaatttaacagcttctacaaataaattagatgatta 833
Query: 121 ttttaaatagatgggaagggagaaggggggaggggaagcaatagatggtagatagataga 180
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 832 ttttaaatagatgggaagggagaaggggggaggggaagcaatagatggttggtagataga 773
Query: 181 gagataatagagattagatat----gatagatagagattagatagatgatagatatgata 236
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 772 tagataatagagattagatatgatagatagatagagattagatagatgatagatatgata 713
Query: 237 gatagatgataaatatatagtatcttgactgacaggctgacagactgactatggatggaa 296
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 712 gatagatgataaatatatagtatcttgactgacaggctgacagacagacaatggatggaa 653
Query: 297 ggcacactccttgcttttccctgtctctctggatacaaggactccattataggaagtgga 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ggcacactccttgcttttccctgtctctctggatacaaggactccattataggaagtgga 593
Query: 357 gtgtaacaagttgagcttcccaacctccacaggtctttttctctccttttcttttcctgt 416
||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gtggaacaagttgagctccccaacctccacaggtctttttctctccttttcttttcctgt 533
Query: 417 tgaaccctcctaagcagttcctctgtgccgacagcccagatgcatttgattcttgggtca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tgaaccctcctaagcagttcctctgtgccgacagcccagatgcatttgattcttgggtca 473
Query: 477 ggttatgttgctcttg 492
||||||||||||||||
Sbjct: 472 ggttatgttgctcttg 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_c10.g1 MSMg01no515_c10.g1 CHROMAT_FILE:
MSMg01no515_c10.g1 PHD_FILE: MSMg01no515_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:21 2005
(620 letters)
>mm_chr6_31524704_31525723
Length = 1020
Score = 1172 bits (606), Expect = 0.0
Identities = 618/624 (99%), Gaps = 4/624 (0%)
Strand = Plus / Plus
Query: 1 tgtccttctttgaatcttctaaccactatgaggtttgtttgtttatgacactggggatta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tgtccttctttgaatgttctaaccactatgaggtttgtttgtttatgacactggggatta 256
Query: 61 aagctagggtctcacacgggataggcaatcacttgactactgactgtgtccccagccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aagctagggtctcacacgggataggcaatcacttgactactgactgtgtccccagccatt 316
Query: 121 tggttttttgttttgttttgttgttggtggtggtgttttgc----ttgtttgtttgtttg 176
|||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 317 tggttttttgttttgttttgttgttgttggtggtgttttgcttgtttgtttgtttgtttg 376
Query: 177 tttgaggcagggtctttttaagttatctttgctacagcctaatttgcagcttcaacctac 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tttgaggcagggtctttttaagttatctttgctacagcctaatttgcagcttcaacctac 436
Query: 237 caatttgtgcccaggaacgaggaccaggactgaggatgccctctttctgcacaatgcctg 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 caatttgtgcccaggaacgaggaccaggactgaggatgccctctttctgcacaatgcctg 496
Query: 297 cacatgcagagtctctgcattttgacacccacaagctccgcagcttccctctcctactgt 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cacatgcagagtctctgcattttgacacccacaagctccgcagcttccctctcctactgt 556
Query: 357 gactcatcagcattctcctttccagtgttttggagtgggtgttgatggaggggaacgtgg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gactcatcagcattctcctttccagtgttttggagtgggtgttgatggaggggaacgtgg 616
Query: 417 atttccagatagcatctcatgcagcccagcctggtcttgaactcattgtgaagccaagga 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 atttccagatagcatctcatgcagcccagcctggtcttgaactcattgtgaagccaagga 676
Query: 477 aggccatgaactcctgatttcctcttctaccttccaagtgtggagattacaggtatgtgc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aggccatgaactcctgatttcctcttctaccttccaagtgtggagattacaggtatgtgc 736
Query: 537 cacgtcactgggactattggctgtaatgttttgggtttggttgttcgaatatctatttat 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 cacgtcactgggactattggctgtaatgttttgggtttggttgttcgaatatctatttat 796
Query: 597 cacttctgctcatgtgcaggtgct 620
||||||||||||||||||||||||
Sbjct: 797 cacttctgctcatgtgcaggtgct 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
