NNNNCCCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCATTTCTGAGCCCCATTTTTTAATGGGGTTATTT
GATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAG
TCCCCTATCTGATTTAGGATAGGTAATGATCCTTTCCCAATCTGTTGGTG
GTCTTTTTGTCTTACTGACGGTGTCTTTTGCCTCGCAGAAACTTTGGAGT
TTCTTTAGGTCCCATTTGTCAATTCTCGATCTTACAGTACAAGCCATTAC
TGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCC
CCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCC
TTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCAAT
TCGCATTCTTCTACACGATAACAACCAGTTGTGCTAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCTAAGATC
AAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCA
TTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAA
TTGCTCTGTAGTAAAGCTTTAGGTCTGGCATGGTGATTCTGCCAGAAGTT
CTTTTATCCTTGAGAAGACTTTTTGCTATCCTAGGTTTTTTGTTATN

NTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTTATAACTTTCATGTA
CTTTGGGACTATAATCTTAATAACTTTTAAATAATGATTCTTAAATAAGA
ATTCTATCCTTAAGTTGTTAAAGGACTGAAGCCCTGAGGGTCAACAAAAA
AAATCAAAACAGGCAACCTCAGGAGACAGGAGATTGAGGGGACCCTCCAG
AATGCACCAGAGACCTGGGAAGTGAGAGACTCTCAGGACTGCCTGCCCAA
CAGTAGGGAGAGAGAACTTATAAAGCCCATCTCCAGCAAGAAGACAGGGC
ATCAAATGGGGGAGGGGGGGGCAATCCCACAGTCACTGACCCATAATTGT
TCCTGTCTTAATTCTTAAATATTCTTAAGAATTCTAAAAATGTCTCCACT
TTAGTCACTGTATGTTATACTCCTGAAGTGAGAAAAGACCTGTGTGCAAA
TTTTGCTATTTACCAGACTGTGGTCTTGAGGTAACATGATTTAAATGGTA
AGAGTCTTGGATGTTATCAGCATAACCTGAGGAACTACCATGTGCTTCTT
CCCAGTAACAGGGATGATAAGTGCAAAGACAGATGCAAGTACTTGGGAGA
TGGTCTTTCTTCCTCCCCTCATTCATCTACATGGCCAAGTCACTCCTCTA
TGTCAAGAAGATGGGAAGAATGTGTGTGACTCACAAGTCACATGGAAGAA
AAAAGAATTCCAAA

Query= MSMg01no515_f15.g1 MSMg01no515_f15.g1 CHROMAT_FILE:
MSMg01no515_f15.g1 PHD_FILE: MSMg01no515_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:38 2005
         (625 letters)



>mm_chr6_11903028_11904052
          Length = 1025

 Score =  938 bits (485), Expect = 0.0
 Identities = 494/497 (99%), Gaps = 1/497 (0%)
 Strand = Plus / Minus

                                                                        
Query: 129  aggcaacctcaggagacaggagattgaggggaccctccagaatgcaccagagacctggga 188
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 aggcaacctcaggagacaggagattgaggggaccctccagaatgcaccagagacctggga 966

                                                                        
Query: 189  agtgagagactctcaggactgcctgcccaacagtagggagagagaacttataaagcccat 248
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965  agtgaaagactctcaggactgcctgcccaacagtagggagagagaacttataaagcccat 906

                                                                        
Query: 249  ctccagcaagaagacagggcatcaaatgggggaggggggggcaatcccacagtcactgac 308
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 905  ctccagcaagaagacagggcatcaaatggggga-gggggggcaatcccacagtcactgac 847

                                                                        
Query: 309  ccataattgttcctgtcttaattcttaaatattcttaagaattctaaaaatgtctccact 368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846  ccataattgttcctgtcttaattcttaaatattcttaagaattctaaaaatgtctccact 787

                                                                        
Query: 369  ttagtcactgtatgttatactcctgaagtgagaaaagacctgtgtgcaaattttgctatt 428
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786  ttagtcactgtatgttatactcctgaagtgagaaaagacctgtgtgcaaattttgctatt 727

                                                                        
Query: 429  taccagactgtggtcttgaggtaacatgatttaaatggtaagagtcttggatgttatcag 488
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726  taccagactgtggtcttgaggtaacatgatttaaatggtaagagtcttggatgttatcag 667

                                                                        
Query: 489  cataacctgaggaactaccatgtgcttcttcccagtaacagggatgataagtgcaaagac 548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666  cataacctgaggaactaccatgtgcttcttcccagtaacagggatgataagtgcaaagac 607

                                                                        
Query: 549  agatgcaagtacttgggagatggtctttcttcctcccctcattcatctacatggccaagt 608
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 606  agatgcaagtacttgggagatggtctttcttcctcccctcatccatctacatggccaagt 547

                             
Query: 609  cactcctctatgtcaag 625
            |||||||||||||||||
Sbjct: 546  cactcctctatgtcaag 530


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space:   624225
Effective search space used:   624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)